RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 TBCELQ5QJ74 424 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 AGAP9Q5VTM2 703 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 ZPBP2Q6X784 338 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 SH3GLB1Q9Y371 365 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 H3BNX3 289 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 NFIBO00712 420 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 ITGB3P05106 788 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 GFAPP14136 432 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 PKNOX1P55347 436 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 MOGSQ13724 837 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 MPP2Q14168 576 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 DGKDQ16760 1214 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 ZNF668Q96K58 619 aaPredicted RBP12.13□□□□□ -0.47
ATRX-214ENST00000624166 TUBGCP5Q96RT8 1024 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 C9orf16Q9BUW7 83 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 EBF3Q9H4W6 596 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 PLEKHA5Q9HAU0 1116 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 NMRAL1Q9HBL8 299 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.13□□□□□ -0.478e-6■■■■□ 23.2
ATRX-214ENST00000624166 ADAM28Q9UKQ2 775 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 POLIQ9UNA4 740 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 SQORQ9Y6N5 450 aa12.13□□□□□ -0.47
ATRX-214ENST00000624166 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
ATRX-214ENST00000624166 ASTN2O75129 1339 aaPredicted RBP12.13□□□□□ -0.47
ATRX-214ENST00000624166 C2orf71A6NGG8 1288 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 KRT75O95678 551 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 GNAZP19086 355 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 ATICP31939 592 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 CDKN2BP42772 138 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 KCNK10P57789 538 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 TDRD10Q5VZ19 366 aaKnown RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 APOBEC3HQ6NTF7 200 aaKnown RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 EFL1Q7Z2Z2 1120 aaKnown RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 CAMK1DQ8IU85 385 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 HTR3CQ8WXA8 447 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 SLC7A8Q9UHI5 535 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 TMEM150BA6NC51 233 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 CCDC130P13994 396 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 SOX10P56693 466 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 CCNA1P78396 465 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 ENPEPQ07075 957 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 PRMT9Q6P2P2 845 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 MPZL3Q6UWV2 235 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 METTL23Q86XA0 190 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 PALMDQ9NP74 551 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 MYH2Q9UKX2 1941 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 TRIM38O00635 465 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 HDAC3O15379 428 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 UNGP13051 313 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 PRDX6P30041 224 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 LPIN1Q14693 890 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 PRKD1Q15139 912 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 FNBP1LQ5T0N5 605 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
ATRX-214ENST00000624166 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 CD101Q93033 1021 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATRX-214ENST00000624166 RNF157Q96PX1 679 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 IL1RL2Q9HB29 575 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 FAM49BQ9NUQ9 324 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 MYH6P13533 1939 aa12.12□□□□□ -0.47
ATRX-214ENST00000624166 KLF11O14901 512 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 ITGA2BP08514 1039 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 PGM5Q15124 567 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 NRF1Q16656 503 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TTC7BQ86TV6 843 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 VPS50Q96JG6 964 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 SLC25A23Q9BV35 468 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 ZNF23P17027 643 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 MGAT1P26572 445 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 ATP1A4Q13733 1029 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 INSCQ1MX18 579 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms