RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 BLOC1S4Q9NUP1 217 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 TAS2R14Q9NYV8 317 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 AGO2Q9UKV8 859 aaKnown RBP8.15□□□□□ -1.1
VPS11-209ENST00000622309 SORCS3Q9UPU3 1222 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 PCDHGA8Q9Y5G5 932 aa8.15□□□□□ -1.1
VPS11-209ENST00000622309 H3BMQ9 156 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 RGS13O14921 159 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 KLHL2O95198 593 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 BCL10O95999 233 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 FTLP02792 175 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 NR4A2P43354 598 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ATP6V0D1P61421 351 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 GPC5P78333 572 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 MRPS22P82650 360 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 GRB10Q13322 594 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 DGKDQ16760 1214 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 PGS1Q32NB8 556 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 PGM2L1Q6PCE3 622 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 PRR23CQ6ZRP0 262 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 DENND5BQ6ZUT9 1274 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 AKAP14Q86UN6 197 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ELMOD2Q8IZ81 293 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ZNF420Q8TAQ5 688 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 PAWRQ96IZ0 340 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 C8orf48Q96LL4 319 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 COG8Q96MW5 612 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 RIOK1Q9BRS2 568 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 TXNDC16Q9P2K2 825 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 AJAP1Q9UKB5 411 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 APOBEC2Q9Y235 224 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 SNTNA6NMZ2 147 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 IDH3BO43837 385 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 AOC1P19801 751 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 CD247P20963 164 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 WEE1P30291 646 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 TTKP33981 857 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 EIF3EP60228 445 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 STX1BP61266 288 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 CHRNEQ04844 493 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 DRAP1Q14919 205 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 CCNG2Q16589 344 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 NRF1Q16656 503 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 CDONQ4KMG0 1287 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 SLC10A5Q5PT55 438 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ZFP1Q6P2D0 407 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 FRMD5Q7Z6J6 570 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 DCP2Q8IU60 420 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 BANPQ8N9N5 519 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 RAD54LQ92698 747 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ALPK1Q96QP1 1244 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 GIMAP4Q9NUV9 329 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 RIC8BQ9NVN3 520 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ARMC1Q9NVT9 282 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 GDAP2Q9NXN4 497 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 PCDHA6Q9UN73 950 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 RNF11Q9Y3C5 154 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 PCDHA8Q9Y5H6 950 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ST14Q9Y5Y6 855 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 NUP98P52948 1817 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 DOT1LQ8TEK3 1739 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 E5RJQ4 531 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 H7C0C1 242 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 FSCN2O14926 492 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 MUSKO15146 869 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 SNAP91O60641 907 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 NTSR2O95665 410 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 CXCR2P25025 360 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 EEF1DP29692 281 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 HADHBP55084 474 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 CTAG1AP78358 180 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 OCA2Q04671 838 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 GATAD2AQ86YP4 633 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 NPAS4Q8IUM7 802 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 HACE1Q8IYU2 909 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 RMDN1Q96DB5 314 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 ZNF641Q96N77 438 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 CALN1Q9BXU9 219 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 SLC2A11Q9BYW1 496 aa8.14□□□□□ -1.11
VPS11-209ENST00000622309 WDR6Q9NNW5 1121 aaKnown RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 CHORDC1Q9UHD1 332 aaPredicted RBP8.14□□□□□ -1.11
VPS11-209ENST00000622309 ASNA1O43681 348 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 SPAG6O75602 509 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 ALX3O95076 343 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 PCP11498 1178 aaKnown RBP8.13□□□□□ -1.11
VPS11-209ENST00000622309 ZNF182P17025 639 aaPredicted RBP8.13□□□□□ -1.11
VPS11-209ENST00000622309 GRK2P25098 689 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 SERPINB1P30740 379 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 PPP2R2BQ00005 443 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 TRPC3Q13507 836 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 EPHA7Q15375 998 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 KRT79Q5XKE5 535 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 LYSMD3Q7Z3D4 306 aa8.13□□□□□ -1.11
VPS11-209ENST00000622309 RALGPS2Q86X27 583 aaPredicted RBP8.13□□□□□ -1.11
VPS11-209ENST00000622309 CHERPQ8IWX8 916 aaKnown RBP8.13□□□□□ -1.11
VPS11-209ENST00000622309 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms