RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HAT1O14929 419 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 CLDN3O15551 220 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 RAD17O75943 681 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 MYO1DO94832 1006 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ALX3O95076 343 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ATF2P15336 505 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 PTK2BQ14289 1009 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 C6orf52Q5T4I8 152 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 SLX4IPQ5VYV7 408 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 DCP2Q8IU60 420 aaKnown RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 SLC15A4Q8N697 577 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 ALKBH8Q96BT7 664 aaKnown RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 HOXD1Q9GZZ0 328 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 WWP1Q9H0M0 922 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 RPF2Q9H7B2 306 aaKnown RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 HACD3Q9P035 362 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 MOSPD1Q9UJG1 213 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 CORINQ9Y5Q5 1042 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 FAM237BA0A1B0GVD1 139 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 J3QRK9 145 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 M0QX08 132 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 EIF3DO15371 548 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS11-207ENST00000620429 KLHL2O95198 593 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 NDUFB10O96000 172 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 DHRS4L1P0CG22 281 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 BDNFP23560 247 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 GABRB3P28472 473 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 IST1P53990 364 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 CDKL1Q00532 357 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 STX3Q13277 289 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ITGADQ13349 1161 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 PDK1Q15118 436 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ABCB5Q2M3G0 1257 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ANKRD26P1Q6NSI1 321 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 LYSMD3Q7Z3D4 306 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 GALNT13Q8IUC8 556 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 NATD1Q8N6N6 113 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 FBXL8Q96CD0 374 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ZNF486Q96H40 463 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 PWWP2AQ96N64 755 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 EIF2AK1Q9BQI3 630 aaKnown RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 CAAP1Q9H8G2 361 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 TBC1D14Q9P2M4 693 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 PSMC3IPQ9P2W1 217 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 SEPT3Q9UH03 358 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 DAPK2Q9UIK4 370 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 CDH22Q9UJ99 828 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 SERPINA10Q9UK55 444 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 SCAF8Q9UPN6 1271 aaKnown RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 MYRFQ9Y2G1 1151 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ASTN2O75129 1339 aaPredicted RBP10.68□□□□□ -0.7
VPS11-207ENST00000620429 POC1B-GALNT4F8VUJ3 575 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 H0YJX3 145 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 NFKBIEO00221 500 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 XPO1O14980 1071 aaKnown RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 TBX3O15119 743 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 TMCC2O75069 709 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 PRKCAP17252 672 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 CTRB1P17538 263 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 GNL1P36915 607 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 CLK3P49761 638 aaKnown RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 GALNT2Q10471 571 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 HSF5Q4G112 596 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 CTRB2Q6GPI1 263 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 MOXD1Q6UVY6 613 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 TOR1AIP2Q8NFQ8 470 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ZNF564Q8TBZ8 553 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 TCP10LQ8TDR4 215 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 GRK7Q8WTQ7 553 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 TANKQ92844 425 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 CD101Q93033 1021 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ZNF512Q96ME7 567 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 ALPK1Q96QP1 1244 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 GCOM2Q9BZD3 368 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ZBTB21Q9ULJ3 1066 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 RNF11Q9Y3C5 154 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 GREB1LQ9C091 1923 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 GSTTP1A0A1W2PQM5 241 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 FAM86B1E9PN63 330 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 PSMD11O00231 422 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 EML1O00423 815 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 MEIS2O14770 477 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 SNAP91O60641 907 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 SERPINA6P08185 405 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 FAM86B2P0C5J1 330 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 DCKP27707 260 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 TTKP33981 857 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ECE1P42892 770 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 P2RX3P56373 397 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 BFSP1Q12934 665 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 PCSK7Q16549 785 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 CCNG2Q16589 344 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms