RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 PKDCCQ504Y2 493 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 FYB2Q5VWT5 728 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 SDE2Q6IQ49 451 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 NAXDQ8IW45 347 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 FAM217AQ8IXS0 508 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 SCML4Q8N228 414 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 ACOX2Q99424 681 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 ULBP1Q9BZM6 244 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 SLC27A6Q9Y2P4 619 aa23.07■■□□□ 1.28
SRRT-218ENST00000620394 DSPP15924 2871 aaKnown RBP23.07■■□□□ 1.28
SRRT-218ENST00000620394 CKAP5Q14008 2032 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 FTH1P19P0C7X4 201 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 SETSIPP0DME0 302 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 VDRP11473 427 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 PLEKHG6Q3KR16 790 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 SYCP2LQ5T4T6 812 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 CHPFQ8IZ52 775 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 CPXM2Q8N436 756 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 IPO4Q8TEX9 1081 aaKnown RBP23.06■■□□□ 1.28
SRRT-218ENST00000620394 KCTD13Q8WZ19 329 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 PLD4Q96BZ4 506 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 HESX1Q9UBX0 185 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 AGO1Q9UL18 857 aaKnown RBP23.06■■□□□ 1.28
SRRT-218ENST00000620394 KIAA1257Q9ULG3 409 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 STRIP2Q9ULQ0 834 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 FREM2Q5SZK8 3169 aa23.06■■□□□ 1.28
SRRT-218ENST00000620394 PPP1R3GB7ZBB8 358 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 GFRA2O00451 464 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 P4HA2O15460 535 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 SH3BP5O60239 455 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 NDUFS2O75306 463 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 PAEPP09466 180 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 CD19P15391 556 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 GNSP15586 552 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 WASP42768 502 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 ADIGQ0VDE8 80 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 MORC3Q14149 939 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 RSRC2Q7L4I2 434 aaKnown RBP23.05■■□□□ 1.28
SRRT-218ENST00000620394 RGL4Q8IZJ4 473 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 LMO3Q8TAP4 145 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 FOXJ1Q92949 421 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 ZNF419Q96HQ0 510 aaPredicted RBP23.05■■□□□ 1.28
SRRT-218ENST00000620394 NT5C1BQ96P26 610 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 ZDHHC5Q9C0B5 715 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 OLA1Q9NTK5 396 aaKnown RBP23.05■■□□□ 1.28
SRRT-218ENST00000620394 PLK2Q9NYY3 685 aa23.05■■□□□ 1.28
SRRT-218ENST00000620394 PLXNB3Q9ULL4 1909 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 MFAP3P55082 362 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 LRMPQ12912 555 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 TRIP4Q15650 581 aaPredicted RBP23.04■■□□□ 1.28
SRRT-218ENST00000620394 CCDC40Q4G0X9 1142 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 WDR45BQ5MNZ6 344 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 LCLAT1Q6UWP7 414 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 PDZD3Q86UT5 571 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 BHMTQ93088 406 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 CAMK1GQ96NX5 476 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 CCDC86Q9H6F5 360 aaKnown RBP23.04■■□□□ 1.28
SRRT-218ENST00000620394 LRRC4Q9HBW1 653 aa23.04■■□□□ 1.28
SRRT-218ENST00000620394 APOBEC2Q9Y235 224 aaKnown RBP23.04■■□□□ 1.28
SRRT-218ENST00000620394 MUC22E2RYF6 1773 aaPredicted RBP23.04■■□□□ 1.28
SRRT-218ENST00000620394 SLC12A8A0AV02 714 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 BICDL2A1A5D9 508 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 HMBSP08397 361 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 MARSP56192 900 aaKnown RBP23.03■■□□□ 1.28
SRRT-218ENST00000620394 GRIK2Q13002 908 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 ENPP2Q13822 863 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 ISM2Q6H9L7 571 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 TMEM270Q6UE05 265 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 DENND1CQ8IV53 801 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 NELFBQ8WX92 580 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 TFAP2BQ92481 460 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 CNGB3Q9NQW8 809 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 HBS1LQ9Y450 684 aaKnown RBP23.03■■□□□ 1.28
SRRT-218ENST00000620394 PTPRBP23467 1997 aa23.03■■□□□ 1.28
SRRT-218ENST00000620394 NPC1O15118 1278 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 KLHL10Q6JEL2 608 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 C19orf48Q6RUI8 117 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 CCNI2Q6ZMN8 369 aaPredicted RBP23.02■■□□□ 1.28
SRRT-218ENST00000620394 TRIM59Q8IWR1 403 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 SIX6OS1Q8N1H7 587 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 NDRG1Q92597 394 aaKnown RBP23.02■■□□□ 1.28
SRRT-218ENST00000620394 MRGPRX1Q96LB2 322 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 IPO9Q96P70 1041 aaKnown RBP23.02■■□□□ 1.28
SRRT-218ENST00000620394 ZSWIM1Q9BR11 485 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 CACNA2D2Q9NY47 1150 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 STOML2Q9UJZ1 356 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.02■■□□□ 1.28
SRRT-218ENST00000620394 NFE2L3Q9Y4A8 694 aa23.02■■□□□ 1.28
SRRT-218ENST00000620394 YJEFN3A6XGL0 299 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 E7ENQ6 273 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 ZNF132P52740 706 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 DAOAP59103 153 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 GCNT1Q02742 428 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 STILQ15468 1287 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 COL28A1Q2UY09 1125 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 BSPRYQ5W0U4 402 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 MSANTD2Q6P1R3 559 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 GLRX5Q86SX6 157 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 FMNL3Q8IVF7 1028 aa23.01■■□□□ 1.27
SRRT-218ENST00000620394 PPM1KQ8N3J5 372 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms