RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 DMAP1Q9NPF5 467 aaPredicted RBP3.14□□□□□ -1.91
LPP-221ENST00000618621 ARHGEF3Q9NR81 526 aa3.14□□□□□ -1.91
LPP-221ENST00000618621 LMCD1Q9NZU5 365 aa3.14□□□□□ -1.91
LPP-221ENST00000618621 FNDC3AQ9Y2H6 1198 aaKnown RBP3.14□□□□□ -1.91
LPP-221ENST00000618621 SPDYE5A6NIY4 337 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 KPNA6O60684 536 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MAPK1P28482 360 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MZF1P28698 734 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 RPL14P50914 215 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 PSMC6P62333 389 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 NFIAQ12857 509 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SPDYE7PQ495Y7 208 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TWF2Q6IBS0 349 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 APOL4Q9BPW4 351 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GPAMQ9HCL2 828 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 BTBD7Q9P203 1132 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMCO1Q9UM00 188 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 IGSF9BQ9UPX0 1349 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GSC2O15499 205 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DGKIO75912 1065 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HOXB6P17509 224 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 LHX1P48742 406 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MARCKSL1P49006 195 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PRIM2P49643 509 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 KDELC2Q7Z4H8 507 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HORMAD1Q86X24 394 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 BEGAINQ9BUH8 593 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PLGRKTQ9HBL7 147 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CASS4Q9NQ75 786 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DIABLOQ9NR28 239 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MAP3K13O43283 966 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ATMINO43313 823 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 SERPINI2O75830 405 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CYP2F1P24903 491 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RXRGP48443 463 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HK2P52789 917 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OTUD4Q01804 1114 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 VEPH1Q14D04 833 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PKN2Q16513 984 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 GSTA3Q16772 222 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TDRD10Q5VZ19 366 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 PCNX4Q63HM2 1172 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DRAXINQ8NBI3 349 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 LRRC39Q96DD0 335 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MRPL48Q96GC5 212 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 VMP1Q96GC9 406 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMEM237Q96Q45 408 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 STN1Q9H668 368 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 C8orf4Q9NR00 106 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CFAP99D6REC4 459 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HMOX2P30519 316 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OVGP1Q12889 678 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MTMR2Q13614 643 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FRG1Q14331 258 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ECM1Q16610 540 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ATP6AP1LQ52LC2 224 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ANGPTL8Q6UXH0 198 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CCDC33Q8N5R6 958 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MTERF3Q96E29 417 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OXNAD1Q96HP4 312 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF184Q99676 751 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 C9orf16Q9BUW7 83 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CHST12Q9NRB3 414 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CISHQ9NSE2 258 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 BLOC1S4Q9NUP1 217 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FSCN2O14926 492 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MICAL2O94851 1124 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TGDSO95455 350 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GH1P01241 217 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ALADP13716 330 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FOSL1P15407 271 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RPS12P25398 132 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 RGS4P49798 205 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DGUOKQ16854 277 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TJAP1Q5JTD0 557 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ANGEL2Q5VTE6 544 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 HGSNATQ68CP4 663 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 LRRC74BQ6ZQY2 392 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 C15orf52Q6ZUT6 534 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 EXOC3L1Q86VI1 746 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 WDR49Q8IV35 697 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FBXO36Q8NEA4 188 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MAGEE2Q8TD90 523 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ANKRD49Q8WVL7 239 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TUBGCP3Q96CW5 907 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMEM121Q9BTD3 319 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OVOS2A0A0J9YW53 1432 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OVOS2Q6IE36 1432 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CD163L1Q9NR16 1453 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 POLRMTO00411 1230 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 GPR182O15218 404 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RHOBTB1O94844 696 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SEC24DO94855 1032 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ATP6V1C1P21283 382 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FASP25445 335 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 KRT20P35900 424 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RNF219Q5W0B1 726 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 NOTUMQ6P988 496 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZFPM1Q8IX07 1006 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DEFB107AQ8IZN7 70 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms