RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 AZIN2Q96A70 460 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 TTC17Q96AE7 1141 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 LIN37Q96GY3 246 aaPredicted RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 PSMG3-AS1Q96PY0 264 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 GJB4Q9NTQ9 266 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ELOVL2Q9NXB9 296 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 RBAKQ9NYW8 714 aaPredicted RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 STK17AQ9UEE5 414 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 DSPP15924 2871 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 NEDD8-MDP1E9PL57 170 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 F8VP50 259 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 OPA1O60313 960 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ADH1BP00325 375 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 TNNC2P02585 160 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 SRPRAP08240 638 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 CD38P28907 300 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 CSNK1EP49674 416 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 TOB1P50616 345 aaPredicted RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 SLC5A3P53794 718 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 CLDN10P78369 228 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 CLN3Q13286 438 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 EIF3IQ13347 325 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 GNL2Q13823 731 aaKnown RBP4.82□□□□□ -1.64
SNCA-213ENST00000618500 ZNF174Q15697 407 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ANO4Q32M45 955 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 KCNT1Q5JUK3 1230 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 ADALQ6DHV7 355 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 HPDLQ96IR7 371 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.82□□□□□ -1.64
SNCA-213ENST00000618500 NCKAP1Q9Y2A7 1128 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 NME7Q9Y5B8 376 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
SNCA-213ENST00000618500 MYOFQ9NZM1 2061 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 PTPRJQ12913 1337 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 LRRC72A6NJI9 287 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 HHLA1C9JL84 531 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 ALOX15BO15296 676 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 WNT1P04628 370 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 GOT1P17174 413 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 ACAT1P24752 427 aaKnown RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 MAOBP27338 520 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 ATP5C1P36542 298 aaKnown RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 GABREP78334 506 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 RILPL1Q5EBL4 403 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 MDH1BQ5I0G3 518 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 USP49Q70CQ1 688 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 CRYBG2Q8N1P7 616 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 CSGALNACT2Q8N6G5 542 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 EXD3Q8N9H8 876 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 TAF4BQ92750 862 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 CGRRF1Q99675 332 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 SNX25Q9H3E2 840 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 BLOC1S4Q9NUP1 217 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 SNX9Q9Y5X1 595 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 USP3Q9Y6I4 520 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 CHD5Q8TDI0 1954 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 TLR4O00206 839 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 IRAK2O43187 625 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 STC2O76061 302 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 DNTTP04053 509 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 LONP1P36776 959 aaKnown RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 GNL1P36915 607 aaPredicted RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 ACOT2P49753 483 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 STK3Q13188 491 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 PSMD6Q15008 389 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 TRIP4Q15650 581 aaPredicted RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 DUOXA2Q1HG44 320 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 MPPE1Q53F39 396 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 NEK5Q6P3R8 708 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 PAQR9Q6ZVX9 377 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 GPBP1Q86WP2 473 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 GPD1LQ8N335 351 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 TNIP3Q96KP6 325 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 DUSP23Q9BVJ7 150 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 MIR1-1HGQ9H1L0 117 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 SLC6A17Q9H1V8 727 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 CCSER2Q9H7U1 834 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 PRSS16Q9NQE7 514 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
SNCA-213ENST00000618500 GEMIN8Q9NWZ8 242 aaKnown RBP4.81□□□□□ -1.64
SNCA-213ENST00000618500 LY6G6EA0A0G2JKS1 128 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 EIF3DO15371 548 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNCA-213ENST00000618500 TLR5O60602 858 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CYBBP04839 570 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ITGA2BP08514 1039 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 TMEM191BP0C7N4 346 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 SLFN14P0C7P3 912 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ALPPL2P10696 532 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 ABCB4P21439 1286 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 CACNA2D1P54289 1103 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 GALCP54803 685 aa4.8□□□□□ -1.64
SNCA-213ENST00000618500 WNT7BP56706 349 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms