RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 PCDH11YQ9BZA8 1340 aa3.63□□□□□ -1.83
SMC5-204ENST00000618375 USP42Q9H9J4 1324 aaKnown RBP3.63□□□□□ -1.83
SMC5-204ENST00000618375 ABCA8O94911 1581 aa3.63□□□□□ -1.83
SMC5-204ENST00000618375 RFX7Q2KHR2 1363 aa3.63□□□□□ -1.83
SMC5-204ENST00000618375 RTL9Q8NET4 1388 aa3.63□□□□□ -1.83
SMC5-204ENST00000618375 ZCCHC11Q5TAX3 1644 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 PXDNLA1KZ92 1463 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ZFYVE16Q7Z3T8 1539 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TOPBP1Q92547 1522 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CCDC163A0A0D9SF12 145 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 A0A0U1RQJ8 604 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TLDC2A0PJX2 215 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 FAM170AA1A519 330 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CCDC160A6NGH7 325 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SMIM23A6NLE4 172 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TRPC5OSA6NMA1 111 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 H0Y858 1186 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 STX16-NPEPL1H3BU86 382 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 DDX3XO00571 662 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMC5-204ENST00000618375 GIPC1O14908 333 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 HOXC11O43248 304 aaPredicted RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 ITM2AO43736 263 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 NUAK1O60285 661 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RANBP6O60518 1105 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 PHF2O75151 1096 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TBX10O75333 385 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 KRT36O76013 467 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 OR6B1O95007 311 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SNAPINO95295 136 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ARIH2O95376 493 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 APBB3O95704 486 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 POP4O95707 220 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 A1BGP04217 495 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SHBGP04278 402 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 INHBBP09529 407 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RAC2P15153 192 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ZNF23P17027 643 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 GAP43P17677 238 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 VAMP1P23763 118 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 PRDX6P30041 224 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RRM2P31350 389 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RCVRNP35243 200 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 IDUAP35475 653 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TALDO1P37837 337 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 IGHMBP2P38935 993 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 MAGEA11P43364 429 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 PIP4K2AP48426 406 aaPredicted RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 ALDH3B2P48448 385 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SLC9A3P48764 834 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CARSP49589 748 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 ENTPD1P49961 510 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SLC26A2P50443 739 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 NEK3P51956 506 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 NDUFA8P51970 172 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 GPR85P60893 370 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 VBP1P61758 197 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 HERVK_113P62684 666 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 GHRHRQ02643 423 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TAP1Q03518 808 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 LRRC63Q05C16 580 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RBL2Q08999 1139 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ZNF252P-AS1Q0IIN9 211 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RALGDSQ12967 914 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 OXA1LQ15070 435 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 PDK3Q15120 406 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ZNF124Q15973 351 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 PPP2R5EQ16537 467 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 KCNMB1Q16558 191 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 KRT24Q2M2I5 525 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SMU1Q2TAY7 513 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 TRMT5Q32P41 509 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 CFAP221Q4G0U5 840 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 VWA3BQ502W6 1294 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 DCAF6Q58WW2 860 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SLC10A5Q5PT55 438 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 C10orf62Q5T681 223 aaPredicted RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 ATAD3BQ5T9A4 648 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 NT5DC1Q5TFE4 455 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 VWA5B1Q5TIE3 1220 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CDKAL1Q5VV42 579 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 SCARA3Q6AZY7 606 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 MFSD5Q6N075 450 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 APOA5Q6Q788 366 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 MPZL3Q6UWV2 235 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 ARHGAP36Q6ZRI8 547 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RGS9BPQ6ZS82 235 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 LINC00299Q6ZSB3 139 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 PIK3AP1Q6ZUJ8 805 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 MIGA2Q7L4E1 593 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 GSTA5Q7RTV2 222 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 APTXQ7Z2E3 356 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 TMC3Q7Z5M5 1100 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 RALYLQ86SE5 291 aaKnown RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CDR2LQ86X02 465 aaPredicted RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 RALGPS2Q86X27 583 aaPredicted RBP3.62□□□□□ -1.83
SMC5-204ENST00000618375 LINC00518Q8N0U6 118 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 USHBP1Q8N6Y0 703 aa3.62□□□□□ -1.83
SMC5-204ENST00000618375 CCNYL1Q8N7R7 359 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms