RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SNX30Q5VWJ9 437 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 BBOF1Q8ND07 529 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 EGLN2Q96KS0 407 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 TTC25Q96NG3 672 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 CIB1Q99828 191 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 GIT1Q9Y2X7 761 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SERPINB7O75635 380 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 GYPCP04921 128 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 KRT5P13647 590 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SERPINB6P35237 376 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 THOP1P52888 689 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 NFE2L1Q14494 772 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 PHLDB2Q86SQ0 1253 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 STK32AQ8WU08 396 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 TTC1Q99614 292 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
SRRT-216ENST00000618262 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 KRT4P19013 534 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 IL32P24001 234 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ACAT1P24752 427 aaKnown RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 SHHQ15465 462 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ZNF699Q32M78 642 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 CNPY1Q3B7I2 92 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ZACNQ401N2 412 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 VASH1Q7L8A9 365 aaPredicted RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 VSTM4Q8IW00 320 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 SERINC2Q96SA4 455 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ATP13A3Q9H7F0 1226 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ETNK2Q9NVF9 386 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 PRKAB1Q9Y478 270 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 LRRC42Q9Y546 428 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 ATP2C2O75185 946 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 NOL4O94818 638 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 OR5F1O95221 314 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 DNAJB2P25686 324 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 NOP14P78316 857 aaKnown RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 KRT71Q3SY84 523 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 METTL21CQ5VZV1 264 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 METTL3Q86U44 580 aaKnown RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 TEX19Q8NA77 164 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 HGH1Q9BTY7 390 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 CDC23Q9UJX2 597 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 DNAJC12Q9UKB3 198 aa12.47□□□□□ -0.41
SRRT-216ENST00000618262 GPC6Q9Y625 555 aaPredicted RBP12.47□□□□□ -0.41
SRRT-216ENST00000618262 CHRNB1P11230 501 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 CCNFP41002 786 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 NOMO2Q5JPE7 1267 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 PPP1R21Q6ZMI0 780 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 PGBD4Q96DM1 585 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 CD93Q9NPY3 652 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 TFR2Q9UP52 801 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 SIK3Q9Y2K2 1263 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 TRANK1O15050 2925 aa12.46□□□□□ -0.41
SRRT-216ENST00000618262 KANSL1LA0AUZ9 987 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 LRRC53A6NM62 1247 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 ZMYND10O75800 440 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 PBX2P40425 430 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 ACADVLP49748 655 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 MAP3K7CLP57077 242 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.42
SRRT-216ENST00000618262 KDSRQ06136 332 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 RUNX1T1Q06455 604 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 SPIDRQ14159 915 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 LONP2Q86WA8 852 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.42
SRRT-216ENST00000618262 COG8Q96MW5 612 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 IL23AQ9NPF7 189 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 ALPK3Q96L96 1907 aa12.46□□□□□ -0.42
SRRT-216ENST00000618262 YKT6O15498 198 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 IL33O95760 270 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 BPNT1O95861 308 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CXCL10P02778 98 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 UCHL3P15374 230 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 KRT20P35900 424 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 CBX5P45973 191 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 ARPP19P56211 112 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 ALKAL1Q6UXT8 129 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 AUTS2Q8WXX7 1259 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
SRRT-216ENST00000618262 NRBF2Q96F24 287 aa12.45□□□□□ -0.42
SRRT-216ENST00000618262 MED30Q96HR3 178 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms