RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TOGARAM2Q6ZUX3 1019 aa9□□□□□ -0.97
GPC6-202ENST00000617456 NUDT18Q6ZVK8 323 aa9□□□□□ -0.97
GPC6-202ENST00000617456 INTS8Q75QN2 995 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 CHPFQ8IZ52 775 aa9□□□□□ -0.97
GPC6-202ENST00000617456 KRT222Q8N1A0 295 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CRYBG2Q8N1P7 616 aa9□□□□□ -0.97
GPC6-202ENST00000617456 GUF1Q8N442 669 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 TERB1Q8NA31 727 aa9□□□□□ -0.97
GPC6-202ENST00000617456 RDH13Q8NBN7 331 aa9□□□□□ -0.97
GPC6-202ENST00000617456 C17orf50Q8WW18 174 aa9□□□□□ -0.97
GPC6-202ENST00000617456 ZNF516Q92618 1163 aa9□□□□□ -0.97
GPC6-202ENST00000617456 WBP2Q969T9 261 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CCDC127Q96BQ5 260 aa9□□□□□ -0.97
GPC6-202ENST00000617456 MRPL45Q9BRJ2 306 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 ZNF518BQ9C0D4 1074 aa9□□□□□ -0.97
GPC6-202ENST00000617456 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
GPC6-202ENST00000617456 BLZF1Q9H2G9 400 aa9□□□□□ -0.97
GPC6-202ENST00000617456 DPEP3Q9H4B8 488 aa9□□□□□ -0.97
GPC6-202ENST00000617456 SPHK2Q9NRA0 654 aa9□□□□□ -0.97
GPC6-202ENST00000617456 TMEM30AQ9NV96 361 aa9□□□□□ -0.97
GPC6-202ENST00000617456 DNAJC17Q9NVM6 304 aaKnown RBP9□□□□□ -0.97
GPC6-202ENST00000617456 IL37Q9NZH6 218 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CHORDC1Q9UHD1 332 aaPredicted RBP9□□□□□ -0.97
GPC6-202ENST00000617456 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
GPC6-202ENST00000617456 BLOC1S6Q9UL45 172 aa9□□□□□ -0.97
GPC6-202ENST00000617456 RAD54BQ9Y620 910 aa9□□□□□ -0.97
GPC6-202ENST00000617456 ATP8B3O60423 1300 aa9□□□□□ -0.97
GPC6-202ENST00000617456 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
GPC6-202ENST00000617456 PLXND1Q9Y4D7 1925 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 CABIN1Q9Y6J0 2220 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 MEI4A8MW99 385 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 A8MXQ7 604 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 NEDD8-MDP1E9PL57 170 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 PHACTR2O75167 634 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 GJB3O75712 270 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 GTF2H1P32780 548 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 NCOA4Q13772 614 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 PKP1Q13835 747 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 EDRF1Q3B7T1 1238 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 ZNF667Q5HYK9 610 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 WDR45BQ5MNZ6 344 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 HECTD3Q5T447 861 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 TPGS1Q6ZTW0 290 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 NELFCDQ8IXH7 590 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 IQCF2Q8IXL9 164 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
GPC6-202ENST00000617456 TXLNBQ8N3L3 684 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 B3GALNT2Q8NCR0 500 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 KIAA0895Q8NCT3 520 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 COL26A1Q96A83 441 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 OTUB2Q96DC9 234 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 ZNF419Q96HQ0 510 aaPredicted RBP8.99□□□□□ -0.97
GPC6-202ENST00000617456 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
GPC6-202ENST00000617456 RMDN2Q96LZ7 410 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 MED10Q9BTT4 135 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 B3GNT5Q9BYG0 378 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 NACA2Q9H009 215 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 CCSER2Q9H7U1 834 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 IL21RQ9HBE5 538 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 PNPLA8Q9NP80 782 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 CACNA2D2Q9NY47 1150 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 GMIPQ9P107 970 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 SUSD2Q9UGT4 822 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 ZDHHC9Q9Y397 364 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 NME7Q9Y5B8 376 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.99□□□□□ -0.97
GPC6-202ENST00000617456 BPTFQ12830 3046 aa8.99□□□□□ -0.97
GPC6-202ENST00000617456 PLXNB3Q9ULL4 1909 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 A0A1B0GVL5 298 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 LRRIQ3A6PVS8 624 aaPredicted RBP8.98□□□□□ -0.97
GPC6-202ENST00000617456 WASH3PC4AMC7 463 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 MYO1CO00159 1063 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 KIF5CO60282 957 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 STX10O60499 249 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 ASS1P00966 412 aaKnown RBP8.98□□□□□ -0.97
GPC6-202ENST00000617456 NR3C1P04150 777 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 PSMC2P35998 433 aaKnown RBP8.98□□□□□ -0.97
GPC6-202ENST00000617456 MYL6P60660 151 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 CYP4F3Q08477 520 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 DPYDQ12882 1025 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 ZNF699Q32M78 642 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 NUP93Q8N1F7 819 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 ZNF276Q8N554 614 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 ZCCHC9Q8N567 271 aaKnown RBP8.98□□□□□ -0.97
GPC6-202ENST00000617456 SCAMP5Q8TAC9 235 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 BHMTQ93088 406 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 TOE1Q96GM8 510 aaKnown RBP8.98□□□□□ -0.97
GPC6-202ENST00000617456 CRELD1Q96HD1 420 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 MRGPRX1Q96LB2 322 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 KCNK16Q96T55 309 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 BBS2Q9BXC9 721 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 IMPG2Q9BZV3 1241 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 FBXO44Q9H4M3 255 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 RETREG1Q9H6L5 497 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 GAREM1Q9H706 876 aa8.98□□□□□ -0.97
GPC6-202ENST00000617456 CYP3A43Q9HB55 503 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms