RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SPIRE1Q08AE8 756 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KCNA1Q09470 495 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 EPHA7Q15375 998 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NAPEPLDQ6IQ20 393 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DCP2Q8IU60 420 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 DENND6AQ8IWF6 608 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CSGALNACT2Q8N6G5 542 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TBCDQ9BTW9 1192 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CELF4Q9BZC1 486 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 ANTXR1Q9H6X2 564 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ATAD3AQ9NVI7 634 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 UBAP1Q9NZ09 502 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PCDHA5Q9Y5H7 936 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ADGRG1Q9Y653 693 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PGK2P07205 417 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ZDHHC17Q8IUH5 632 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CFAP52Q8N1V2 620 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ATG16L2Q8NAA4 619 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DCAKDQ8WVC6 231 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NELFBQ8WX92 580 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 FEM1AQ9BSK4 669 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GALNT8Q9NY28 637 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 AIPL1Q9NZN9 384 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PCDHB14Q9Y5E9 798 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MEN1O00255 615 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KRT1P04264 644 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ICAM2P13598 275 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ITGALP20701 1170 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 COPAP53621 1224 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MYBPHQ13203 477 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 BTLAQ7Z6A9 289 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 FAM124AQ86V42 546 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CACUL1Q86Y37 369 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ZFYVE1Q9HBF4 777 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 EML4Q9HC35 981 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 ZDHHC7Q9NXF8 308 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MAPK13O15264 365 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DDX3YO15523 660 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 CAMTA2O94983 1202 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 IRF2P14316 349 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NKX1-1Q15270 411 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 UGP2Q16851 508 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PEX5LQ8IYB4 626 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NETO1Q8TDF5 533 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 IP6K3Q96PC2 410 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CLSTN3Q9BQT9 956 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PAPOLBQ9NRJ5 636 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 FAM217BQ9NTX9 383 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 TMEM161AQ9NX61 479 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TBK1Q9UHD2 729 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 RPS6KA6Q9UK32 745 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CTNND2Q9UQB3 1225 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 A0A096LPK6 155 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 RTCAO00442 366 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 PRPF3O43395 683 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 RPP40O75818 363 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 GPC1P35052 558 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GJA8P48165 433 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CAP1Q01518 475 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KRT72Q14CN4 511 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TAF3Q5VWG9 929 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ANKRD40Q6AI12 368 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 BHLHB9Q6PI77 547 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CXCL17Q6UXB2 119 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GAS2L3Q86XJ1 694 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CACNA2D3Q8IZS8 1091 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 BRIX1Q8TDN6 353 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 SERAC1Q96JX3 654 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 P2RY13Q9BPV8 354 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 VCX3BQ9H321 246 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ATP13A1Q9HD20 1204 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ARHGEF3Q9NR81 526 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DNMT3LQ9UJW3 386 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MAPRE3Q9UPY8 281 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NPHP3-ACAD11A0A0J9YXS1 232 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CAPN5O15484 640 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 SEC13P55735 322 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SGSM1Q2NKQ1 1148 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PANK1Q8TE04 598 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LRMDAQ9H2I8 198 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ABCC13Q9NSE7 274 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 IL1RAPL1Q9NZN1 696 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MYO1AQ9UBC5 1043 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 PALMO75781 387 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SLC16A2P36021 539 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 OC90Q02509 493 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 DUOXA1Q1HG43 343 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ZNF776Q68DI1 518 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 TXNDC8Q6A555 127 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KCTD6Q8NC69 237 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KREMEN2Q8NCW0 462 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NAT6Q93015 286 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ARL5BQ96KC2 179 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DMAP1Q9NPF5 467 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 POLR1DQ9Y2S0 133 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 BTBD19C9JJ37 291 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ZBTB22O15209 634 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SUPT3HO75486 399 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ATP5JP18859 108 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms