RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 ERVFC1P60507 584 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 NME3Q13232 169 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 RBBP5Q15291 538 aaKnown RBP16.56■□□□□ 0.24
DDB2-212ENST00000617022 ODF2Q5BJF6 829 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 TPGS2Q68CL5 300 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 MFSD7Q6UXD7 560 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 STRADAQ7RTN6 431 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 SCD5Q86SK9 330 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 SLC13A5Q86YT5 568 aaPredicted RBP16.56■□□□□ 0.24
DDB2-212ENST00000617022 MICAL1Q8TDZ2 1067 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 SPATA17Q96L03 361 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 SLITRK1Q96PX8 696 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 TCF25Q9BQ70 676 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 HEMGNQ9BXL5 484 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 FBXO44Q9H4M3 255 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 NMUR1Q9HB89 426 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDB2-212ENST00000617022 GPATCH2LQ9NWQ4 482 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 DDX56Q9NY93 547 aaKnown RBP16.56■□□□□ 0.24
DDB2-212ENST00000617022 STK39Q9UEW8 545 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 BAIAP2L1Q9UHR4 511 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 CORO1CQ9ULV4 474 aaPredicted RBP16.56■□□□□ 0.24
DDB2-212ENST00000617022 SCML2Q9UQR0 700 aa16.56■□□□□ 0.24
DDB2-212ENST00000617022 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 CFAP73A6NFT4 308 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 CCT8L1PA6NM43 557 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 SMNDC1O75940 238 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDB2-212ENST00000617022 CXCL14O95715 111 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 RALAP11233 206 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 DNAJB1P25685 340 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 YWHAQP27348 245 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 TUFMP49411 452 aaKnown RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 CAPRIN2Q6IMN6 1127 aaKnown RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 HIBCHQ6NVY1 386 aaPredicted RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 FAM131BQ86XD5 332 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 RCOR2Q8IZ40 523 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 ZDHHC14Q8IZN3 488 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 RBM41Q96IZ5 413 aaKnown RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 RXFP1Q9HBX9 757 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 ENTPD7Q9NQZ7 604 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 GMIPQ9P107 970 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 FNIP2Q9P278 1114 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 MAGED2Q9UNF1 606 aaPredicted RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 SNUPNO95149 360 aaKnown RBP16.55■□□□□ 0.24
DDB2-212ENST00000617022 CD48P09326 243 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 SPATA31D3P0C874 917 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 DRD4P21917 467 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 BTBD8Q5XKL5 378 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 SPATA31D4Q6ZUB0 917 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 POF1BQ8WVV4 589 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 FBXO32Q969P5 355 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 TBC1D31Q96DN5 1066 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 PIGVQ9NUD9 493 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDB2-212ENST00000617022 OSER1Q9NX31 292 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDB2-212ENST00000617022 IL37Q9NZH6 218 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 NUDT5Q9UKK9 219 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 SLC12A4Q9UP95 1085 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 GBF1Q92538 1859 aa16.55■□□□□ 0.24
DDB2-212ENST00000617022 LAMA3Q16787 3333 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 ESYT3A0FGR9 886 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 SLC38A8A6NNN8 435 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 RTN3O95197 1032 aaPredicted RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 ANP32DO95626 131 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 KRT10P13645 584 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 DEUP1Q05D60 604 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 TAF10Q12962 218 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 PPP1R7Q15435 360 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 PLPP4Q5VZY2 271 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 KAZNQ674X7 775 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 SPOCD1Q6ZMY3 1216 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 BNIPLQ7Z465 357 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 TNS4Q8IZW8 715 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CCDC185Q8N715 623 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 SPPL3Q8TCT6 385 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CENPTQ96BT3 561 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 SNRNP25Q9BV90 132 aaKnown RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 OSBPL8Q9BZF1 889 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 UBE2OQ9C0C9 1292 aaKnown RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 SSX2IPQ9Y2D8 614 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 YIPF1Q9Y548 306 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CEP290O15078 2479 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 C3orf70A6NLC5 250 aaPredicted RBP16.54■□□□□ 0.24
DDB2-212ENST00000617022 PRRG1O14668 218 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 ENDOD1O94919 500 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 ALADP13716 330 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 KDELR1P24390 212 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 HSD17B3P37058 310 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CREMQ03060 361 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CA9Q16790 459 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 CPLX4Q7Z7G2 160 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 MON1AQ86VX9 555 aa16.54■□□□□ 0.24
DDB2-212ENST00000617022 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms