RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 PPP1R16BQ96T49 567 aa9.76□□□□□ -0.85
MCM3-207ENST00000616552 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
MCM3-207ENST00000616552 POLR3FQ9H1D9 316 aaPredicted RBP9.76□□□□□ -0.85
MCM3-207ENST00000616552 CISHQ9NSE2 258 aa9.76□□□□□ -0.85
MCM3-207ENST00000616552 PTTG2Q9NZH5 202 aa9.76□□□□□ -0.85
MCM3-207ENST00000616552 BTBD7Q9P203 1132 aa9.76□□□□□ -0.85
MCM3-207ENST00000616552 WDR27A2RRH5 827 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SLC15A5A6NIM6 579 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 TRMUO75648 421 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 SEC24DO94855 1032 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 CLIC3O95833 236 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 ERBB2P04626 1255 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CHRNGP07510 517 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 AOC1P19801 751 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SESN2P58004 480 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 ROR1Q01973 937 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PDE1CQ14123 709 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 TRNP1Q6NT89 227 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 KYAT3Q6YP21 454 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 PQLC1Q8N2U9 271 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 BHLHE22Q8NFJ8 381 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 TMC2Q8TDI7 906 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 DEPDC1BQ8WUY9 529 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 RIT2Q99578 217 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 COG4Q9H9E3 785 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 ZDHHC7Q9NXF8 308 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 EBF1Q9UH73 591 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 HERC5Q9UII4 1024 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 C7orf72A4D263 438 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PMM2O15305 246 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CCNT2O60583 730 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 APBA3O96018 575 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 RXRGP48443 463 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PRAMEP78395 509 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PCLAFQ15004 111 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 BBS12Q6ZW61 710 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 ZNF410Q86VK4 478 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SNX32Q86XE0 403 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 WDR75Q8IWA0 830 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 RBM12BQ8IXT5 1001 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 ACVR1CQ8NER5 493 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CNKSR2Q8WXI2 1034 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 TWNKQ96RR1 684 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 TCHPQ9BT92 498 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 EXOC7Q9UPT5 735 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 FIS1Q9Y3D6 152 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SMIM31A0A1B0GVY4 71 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PRKCGP05129 697 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 KRT19P08727 400 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 THRAP10827 490 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 COX4I1P13073 169 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CDH2P19022 906 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 TFE3P19532 575 aaPredicted RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 NUMBP49757 651 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 HDAC4P56524 1084 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 RPS6P62753 249 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 TFAMQ00059 246 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 IRF9Q00978 393 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 QSER1Q2KHR3 1735 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 CRY2Q49AN0 593 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 NUP93Q8N1F7 819 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SPATA6LQ8N4H0 392 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 TMA16Q96EY4 203 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 RPL10LQ96L21 214 aaKnown RBP9.75□□□□□ -0.85
MCM3-207ENST00000616552 MSTO1Q9BUK6 570 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 IMPG2Q9BZV3 1241 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 COA1Q9GZY4 146 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 PFDN4Q9NQP4 134 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 THAP1Q9NVV9 213 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 SFMBT1Q9UHJ3 866 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 ZNF180Q9UJW8 692 aa9.75□□□□□ -0.85
MCM3-207ENST00000616552 ZC3H11AO75152 810 aaKnown RBP eCLIP9.74□□□□□ -0.854e-10■■□□□ 12.1
MCM3-207ENST00000616552 RNASEH2AO75792 299 aaKnown RBP9.74□□□□□ -0.85
MCM3-207ENST00000616552 OSBPP22059 807 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 NDST2P52849 883 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 PPP2R5DQ14738 602 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 OGFRL1Q5TC84 451 aaPredicted RBP9.74□□□□□ -0.85
MCM3-207ENST00000616552 ANGEL2Q5VTE6 544 aaKnown RBP9.74□□□□□ -0.85
MCM3-207ENST00000616552 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 OGFOD2Q6N063 350 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 CYP2R1Q6VVX0 501 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 UTS2BQ765I0 119 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 CHST15Q7LFX5 561 aaPredicted RBP9.74□□□□□ -0.85
MCM3-207ENST00000616552 DEFB132Q7Z7B7 95 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 PCGF5Q86SE9 256 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 CCDC60Q8IWA6 550 aaPredicted RBP9.74□□□□□ -0.85
MCM3-207ENST00000616552 ACTRT2Q8TDY3 377 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 ATP6V1E2Q96A05 226 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 LRGUKQ96M69 825 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 WRNIP1Q96S55 665 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 USP18Q9UMW8 372 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 NFASCO94856 1347 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 KLF11O14901 512 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 USP12O75317 370 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 IL1BP01584 269 aa9.74□□□□□ -0.85
MCM3-207ENST00000616552 ERVK-10P10266 1014 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms