RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 REXO5Q96IC2 774 aaKnown RBP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 VPS50Q96JG6 964 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 MECRQ9BV79 373 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 ALG8Q9BVK2 526 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CCDC134Q9H6E4 229 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 SMC4Q9NTJ3 1288 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 FBXO28Q9NVF7 368 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 SWAP70Q9UH65 585 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 SH2B3Q9UQQ2 575 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 UBE2J1Q9Y385 318 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 SALL3Q9BXA9 1300 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 LOC105369274A0A096LPK9 316 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 LOC102723532A0A0G2JNH3 316 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 FAM90A20PA6NIJ5 464 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 NXPH3O95157 252 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 ONECUT2O95948 504 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 CD4P01730 458 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 IL6RP08887 468 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-205ENST00000616315 FAM163BP0C2L3 166 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 BDNFP23560 247 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 THBS4P35443 961 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 MPLP40238 635 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 ELLP55199 621 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-205ENST00000616315 TPTEP56180 551 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 SEMA3BQ13214 749 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 PDCLQ13371 301 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 KCNJ12Q14500 433 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 CTXN3Q4LDR2 81 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 ZNF569Q5MCW4 686 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 FAM180BQ6P0A1 224 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 VWA1Q6PCB0 445 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 GPR149Q86SP6 731 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 P3H2Q8IVL5 708 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 OR4N4Q8N0Y3 316 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 USP38Q8NB14 1042 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 XAGE5Q8WWM1 108 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 PGBD1Q96JS3 809 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 FAR2Q96K12 515 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 DPCDQ9BVM2 203 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-205ENST00000616315 GPR63Q9BZJ6 419 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 ABHD16BQ9H3Z7 469 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 JMJD4Q9H9V9 463 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 KCNK9Q9NPC2 374 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 RXFP3Q9NSD7 469 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 ADGRA2Q96PE1 1338 aa4.85□□□□□ -1.63
NEAT1-205ENST00000616315 MBD3L5A6NJ08 208 aaPredicted RBP4.84□□□□□ -1.63
NEAT1-205ENST00000616315 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 STX16O14662 325 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 TSPAN3O60637 253 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 C1RP00736 705 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 EGR2P11161 476 aaPredicted RBP4.84□□□□□ -1.63
NEAT1-205ENST00000616315 ITGAMP11215 1152 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 GKP32189 559 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 RXRGP48443 463 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 TUBP50607 506 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 SUMO2P61956 95 aaKnown RBP4.84□□□□□ -1.63
NEAT1-205ENST00000616315 RNASELQ05823 741 aaKnown RBP4.84□□□□□ -1.63
NEAT1-205ENST00000616315 ERCC6LQ2NKX8 1250 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 ATG16L1Q676U5 607 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 GRHL2Q6ISB3 625 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 DPY19L3Q6ZPD9 716 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 C1orf122Q6ZSJ8 110 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 NELL1Q92832 810 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 KTI12Q96EK9 354 aaPredicted RBP4.84□□□□□ -1.63
NEAT1-205ENST00000616315 PBKQ96KB5 322 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 REEP2Q9BRK0 252 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 KLC4Q9NSK0 619 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 KCTD5Q9NXV2 234 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 EHD3Q9NZN3 535 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 BAG5Q9UL15 447 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 GABRQQ9UN88 632 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 DNAJC16Q9Y2G8 782 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 PCDHB7Q9Y5E2 793 aa4.84□□□□□ -1.63
NEAT1-205ENST00000616315 FER1L4A9Z1Z3 1794 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 ITIH6Q6UXX5 1313 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 B4E171 279 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 YY2O15391 372 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 SEPT4O43236 478 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 SPRY2O43597 315 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 PMPCBO75439 489 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 ESRRBO95718 433 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 IGLV2-14P01704 120 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 CHRM2P08172 466 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 CYP21A2P08686 494 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.642e-14■■□□□ 13.6
NEAT1-205ENST00000616315 CREB1P16220 341 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 MMP8P22894 467 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 ADRA1DP25100 572 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 MCM5P33992 734 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 TSPAN7P41732 249 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 BMPR2Q13873 1038 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 CBFBQ13951 182 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 CYP1B1Q16678 543 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 AAK1Q2M2I8 961 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 ABHD17BQ5VST6 288 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 ANKRD40Q6AI12 368 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 SYNE3Q6ZMZ3 975 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
NEAT1-205ENST00000616315 FSIP1Q8NA03 581 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms