RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EDF1O60869 148 aaKnown RBP19.31■□□□□ 0.68
SPAST-203ENST00000615843 JCHAINP01591 159 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 KLRK1P26718 216 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 PCSK1P29120 753 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 AAGABQ6PD74 315 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 SYTL1Q8IYJ3 562 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 FAM136AQ96C01 138 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 FICDQ9BVA6 458 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 GANQ9H2C0 597 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 ZMYM2Q9UBW7 1377 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 ATG7O95352 703 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 FGFR2P21802 821 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 PTPN11Q06124 597 aaPredicted RBP19.31■□□□□ 0.68
SPAST-203ENST00000615843 BST1Q10588 318 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 LNX1Q8TBB1 728 aaPredicted RBP19.31■□□□□ 0.68
SPAST-203ENST00000615843 DGCR14Q96DF8 476 aaKnown RBP19.31■□□□□ 0.68
SPAST-203ENST00000615843 RAD21L1Q9H4I0 556 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 KRT84Q9NSB2 600 aa19.31■□□□□ 0.68
SPAST-203ENST00000615843 MAPTP10636 758 aaKnown RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 ETS1P14921 441 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 WASHC5Q12768 1159 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 NFIL3Q16649 462 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 TMC7Q7Z402 723 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 KCNK18Q7Z418 384 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 KCNMB4Q86W47 210 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 FAM9CQ8IZT9 166 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 TMCC3Q9ULS5 477 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 SERPIND1P05546 499 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 COX4I1P13073 169 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 BLMHQ13867 455 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 POLD3Q15054 466 aaPredicted RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 SPANXN3Q5MJ09 141 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 BTN2A2Q8WVV5 523 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 NMRAL1Q9HBL8 299 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 FARP1Q9Y4F1 1045 aaPredicted RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 FLT3P36888 993 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 CD151P48509 253 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 ST13P50502 369 aaKnown RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 SNX17Q15036 470 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 TTC30BQ8N4P2 665 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 APOL4Q9BPW4 351 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 POLG2Q9UHN1 485 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 PIGNO95427 931 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 RPL14P50914 215 aaKnown RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 ANGPT1Q15389 498 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 DEPDC7Q96QD5 511 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 SYTL2Q9HCH5 934 aa19.3■□□□□ 0.68
SPAST-203ENST00000615843 PNMA8BQ9ULN7 279 aaPredicted RBP19.3■□□□□ 0.68
SPAST-203ENST00000615843 MAPK1P28482 360 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 NAB1Q13506 487 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 C1DQ13901 141 aaKnown RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 PDZK1Q5T2W1 519 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 ZNF554Q86TJ5 538 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 KAT2BQ92831 832 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 TMEM176AQ96HP8 235 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 PIH1D1Q9NWS0 290 aaKnown RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 ANKRD6Q9Y2G4 727 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 APOC4-APOC2K7ER74 178 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 ZMPSTE24O75844 475 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 APOC2P02655 101 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 TAF6P49848 677 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 PPP4R4Q6NUP7 873 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 GIPC3Q8TF64 312 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 ELMO3Q96BJ8 720 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 RNF225M0QZC1 329 aaPredicted RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 MYL4P12829 197 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 XIAPP98170 497 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 AMHR2Q16671 573 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 TRIQKQ629K1 86 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 ZDHHC13Q8IUH4 622 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 PHACTR1Q9C0D0 580 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 MUC3BQ9H195 1237 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 UBP1Q9NZI7 540 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 C6orf203Q9P0P8 240 aaPredicted RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 MARCKSL1P49006 195 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 SERPINH1P50454 418 aaKnown RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 UBAP2LQ14157 1087 aaKnown RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 NR6A1Q15406 480 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 PGS1Q32NB8 556 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 DALRD3Q5D0E6 543 aaKnown RBP19.29■□□□□ 0.68
SPAST-203ENST00000615843 PERM1Q5SV97 790 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 GLIS3Q8NEA6 775 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 EPS8L1Q8TE68 723 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 CRAMP1Q96RY5 1269 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 TBCBQ99426 244 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 UGT2B28Q9BY64 529 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 PACSIN3Q9UKS6 424 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 DMTF1Q9Y222 760 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 AP4B1Q9Y6B7 739 aa19.29■□□□□ 0.68
SPAST-203ENST00000615843 DPPA5A6NC42 116 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 LRPAP1P30533 357 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 PNPLA4P41247 253 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 HTR3CQ8WXA8 447 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CEP41Q9BYV8 373 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 FBXO6Q9NRD1 293 aaPredicted RBP19.28■□□□□ 0.68
SPAST-203ENST00000615843 ADAM30Q9UKF2 790 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CHKBQ9Y259 395 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 CAMSAP1Q5T5Y3 1602 aa19.28■□□□□ 0.68
SPAST-203ENST00000615843 DNM1LO00429 736 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms