RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 LRCH2Q5VUJ6 765 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 PAPD7Q5XG87 772 aaKnown RBP5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 KRT27Q7Z3Y8 459 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 LAS2Q8IYD9 372 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 BCAS4Q8TDM0 211 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 SCARB1Q8WTV0 552 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ASB12Q8WXK4 309 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ZNF845Q96IR2 970 aaPredicted RBP5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 FCRL5Q96RD9 977 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 AGO4Q9HCK5 861 aaKnown RBP5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 ASNSD1Q9NWL6 643 aa5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 HEMK1Q9Y5R4 338 aaPredicted RBP5.78□□□□□ -1.48
SCAMP1-205ENST00000614488 SPATA31A5Q5VU36 1347 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 SPATA31A7Q8IWB4 1347 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 CCDC194A0A1B0GVG4 234 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 M0QZQ0 153 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 CNOT3O75175 753 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC8A1P32418 973 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 VPS41P49754 854 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 ALDH18A1P54886 795 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 ID2Q02363 134 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 GAB1Q13480 694 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 UBE4AQ14139 1066 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC9C1Q4G0N8 1177 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 GLE1Q53GS7 698 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 KYAT3Q6YP21 454 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 NOL8Q76FK4 1167 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 TFAP2DQ7Z6R9 452 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 MORC1Q86VD1 984 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 GATAD2AQ86YP4 633 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 C16orf52Q8NHV5 167 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 FAR2Q96K12 515 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 GATA5Q9BWX5 397 aaPredicted RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 TRNAU1APQ9NX07 287 aaKnown RBP5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 IGSF9Q9P2J2 1179 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 NFU1Q9UMS0 254 aa5.77□□□□□ -1.49
SCAMP1-205ENST00000614488 PPEF2O14830 753 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 PIP5K1BO14986 540 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 FGBP02675 491 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 CD63P08962 238 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 SETSIPP0DME0 302 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 CTSAP10619 480 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 RPS6KB1P23443 525 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 SERPINB3P29508 390 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 IDUAP35475 653 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC12A2P55011 1212 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 SRSF1Q07955 248 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 C10orf25Q5T742 122 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 C16orf89Q6UX73 402 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 RBM44Q6ZP01 1051 aaKnown RBP5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 UEVLDQ8IX04 471 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 SLC22A17Q8WUG5 538 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 WDR60Q8WVS4 1066 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 NPIPB3Q92617 1050 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 PRPF18Q99633 342 aaKnown RBP5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 TP63Q9H3D4 680 aaPredicted RBP5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 CDC23Q9UJX2 597 aa5.76□□□□□ -1.49
SCAMP1-205ENST00000614488 FFAR2O15552 330 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 TLR2O60603 784 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 SGPL1O95470 568 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 HOXD9P28356 352 aaPredicted RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 HOXA7P31268 230 aaPredicted RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 IL6STP40189 918 aaPredicted RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 AGTR2P50052 363 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 PLCD1P51178 756 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 ZNF84P51523 738 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 ZNF91Q05481 1191 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 DMWDQ09019 674 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 GRM4Q14833 912 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 SHC4Q6S5L8 630 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 MRPL10Q7Z7H8 261 aaKnown RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 TRABD2AQ86V40 505 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 RFX6Q8HWS3 928 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 NRSN1Q8IZ57 195 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 FAM71BQ8TC56 605 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 IGFBPL1Q8WX77 278 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 PIGKQ92643 395 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 CELF1Q92879 486 aaKnown RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 ELOVL1Q9BW60 279 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 SPRTNQ9H040 489 aaPredicted RBP5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 ERVK-5Q9HDB9 667 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 MLXIPLQ9NP71 852 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 MTMR4Q9NYA4 1195 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 LRCH1Q9Y2L9 728 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 PCDHB7Q9Y5E2 793 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 ZMYM2Q9UBW7 1377 aa5.75□□□□□ -1.49
SCAMP1-205ENST00000614488 A0A087WV62 115 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 ABHD14A-ACY1A0A1B0GW23 586 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 C2CD4BA6NLJ0 364 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 ADAM10O14672 748 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 NKX2-8O15522 239 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 ENO1P06733 434 aaKnown RBP5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 TFEBP19484 476 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 STAT6P42226 847 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 TNFAIP2Q03169 654 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 STIM1Q13586 685 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 LAMB3Q13751 1172 aa5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 EARS2Q5JPH6 523 aaKnown RBP5.74□□□□□ -1.49
SCAMP1-205ENST00000614488 NANOGP1Q8N7R0 232 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms