RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	SLCO2A1	Q92959	643 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	MAGOHB	Q96A72	148 aa	Known RBP	7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	ASIC4	Q96FT7	647 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	RNF157	Q96PX1	679 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	KCTD15	Q96SI1	283 aa	Predicted RBP	7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	TTLL2	Q9BWV7	592 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	LMAN2L	Q9H0V9	348 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	RXFP1	Q9HBX9	757 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	GDF3	Q9NR23	364 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	COMMD8	Q9NX08	183 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	GMIP	Q9P107	970 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	STIM2	Q9P246	746 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	AFF4	Q9UHB7	1163 aa	Known RBP	7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	STAP1	Q9ULZ2	295 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	AP4E1	Q9UPM8	1137 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	PCDHB12	Q9Y5F1	795 aa		7.62	□□□□□ -1.19
PVT1-222	ENST00000613916	WDR87	Q6ZQQ6	2873 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	GVINP1	Q7Z2Y8	2422 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	GOLGA6L10	A0A0M3HER8	536 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CCDC151	A5D8V7	595 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FAM187A	A6NFU0	413 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SLC38A8	A6NNN8	435 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ZNF487	B1APH4	448 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	C5orf67	F2Z3F1	127 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CAPN9	O14815	690 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	TEX28	O15482	410 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	IRAK2	O43187	625 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CST8	O60676	142 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	TJP3	O95049	919 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	RTN3	O95197	1032 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	UROD	P06132	367 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ZDHHC11B	P0C7U3	371 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CTSA	P10619	480 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ATF2	P15336	505 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	HMGA1	P17096	107 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	YWHAQ	P27348	245 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	RDX	P35241	583 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ADRA1B	P35368	520 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	BMPR1A	P36894	532 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CETN2	P41208	172 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	NBL1	P41271	181 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FNTA	P49354	379 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CXCR3	P49682	368 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	RPL10A	P62906	217 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SIGLEC14	Q08ET2	396 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SCAP	Q12770	1279 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	HYAL1	Q12794	435 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SEMA3B	Q13214	749 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	NME3	Q13232	169 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SNX1	Q13596	522 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	DHX34	Q14147	1143 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	BRD3	Q15059	726 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	OASL	Q15646	514 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ANKRD20A8P	Q5CZ79	823 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ZFYVE27	Q5T4F4	411 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	DRICH1	Q6PGQ1	229 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CCDC137	Q6PK04	289 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CCNI2	Q6ZMN8	369 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	MON1A	Q86VX9	555 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	JAML	Q86YT9	394 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	PSTK	Q8IV42	348 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	PCDH19	Q8TAB3	1148 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CCDC26	Q8TAB7	109 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SLC35B2	Q8TB61	432 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SLC7A14	Q8TBB6	771 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	GIPC2	Q8TF65	315 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CASP10	Q92851	521 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ATOH1	Q92858	354 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	NTAN1	Q96AB6	310 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	MSLNL	Q96KJ4	702 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CEP295NL	Q96MC4	621 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SEPT5	Q99719	369 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FAM118B	Q9BPY3	351 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	TRIM51	Q9BSJ1	452 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	SMOC2	Q9H3U7	446 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FBXO44	Q9H4M3	255 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	DHX35	Q9H5Z1	703 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	EPB41L5	Q9HCM4	733 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	AAAS	Q9NRG9	546 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	ABCC13	Q9NSE7	274 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	CWC15	Q9P013	229 aa	Known RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FNIP2	Q9P278	1114 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	HSFX1	Q9UBD0	423 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FBXW11	Q9UKB1	542 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	NEU2	Q9Y3R4	380 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	EPG5	Q9HCE0	2579 aa		7.61	□□□□□ -1.19
PVT1-222	ENST00000613916	FRYL	O94915	3013 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	MYLK	Q15746	1914 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	ESYT3	A0FGR9	886 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	FAM72C	H0Y354	149 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	LIAS	O43766	372 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	SEC31A	O94979	1220 aa	Known RBP	7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	F9	P00740	461 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	TUBB	P07437	444 aa		7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	CNP	P09543	421 aa	Known RBP	7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	PECAM1	P16284	738 aa	Predicted RBP	7.6	□□□□□ -1.19
PVT1-222	ENST00000613916	DES	P17661	470 aa		7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms