RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NMUR2Q9GZQ4 415 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 KRT82Q9NSB4 513 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ARHGAP26Q9UNA1 814 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TIMM13Q9Y5L4 95 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 COL2A1P02458 1487 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 C2CD4BA6NLJ0 364 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 TPP1O14773 563 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PMPCBO75439 489 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ZNF189O75820 626 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 PSMG1O95456 288 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PGAM1P18669 254 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PSMB4P28070 264 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 GPD2P43304 727 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PRAMEP78395 509 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PCSK7Q16549 785 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 SLC10A6Q3KNW5 377 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ANKRD20A4Q4UJ75 823 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 UNC93AQ86WB7 457 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PPHLN1Q8NEY8 458 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 GTF3C2Q8WUA4 911 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 TMA16Q96EY4 203 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 HAPLN2Q9GZV7 340 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 MINDY3Q9H8M7 445 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 VTA1Q9NP79 307 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 LAMB2P55268 1798 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 TOMM70O94826 608 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ARIH2O95376 493 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PCSK1P29120 753 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 SERPINB5P36952 375 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 AVPR1AP37288 418 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 NUDT2P50583 147 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 KIF19Q2TAC6 998 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
LIG4-204ENST00000611712 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ZNF410Q86VK4 478 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PIWIL2Q8TC59 973 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 EDEM1Q92611 657 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ELMO2Q96JJ3 720 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PDZD7Q9H5P4 517 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 SSU72Q9NP77 194 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 XPNPEP3Q9NQH7 507 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PLLPQ9Y342 182 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 XIRP1Q702N8 1843 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 AP3B1O00203 1094 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 TIMM44O43615 452 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 C6orf222P0C671 652 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 TCN1P20061 433 aaPredicted RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 CA8P35219 290 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PAPOLAP51003 745 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 DSG1Q02413 1049 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 SLC25A11Q02978 314 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 PDPK2PQ6A1A2 396 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 KRT80Q6KB66 452 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PIGZQ86VD9 579 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 RELL1Q8IUW5 271 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 ANKRD52Q8NB46 1076 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 C10orf82Q8WW14 230 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 TEKT4Q8WW24 435 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 MCRS1Q96EZ8 462 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 CELF6Q96J87 481 aaKnown RBP8.93□□□□□ -0.98
LIG4-204ENST00000611712 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PRDM12Q9H4Q4 367 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 PDLIM7Q9NR12 457 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 SLC38A7Q9NVC3 462 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 LRCH1Q9Y2L9 728 aa8.93□□□□□ -0.98
LIG4-204ENST00000611712 CLUHO75153 1309 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 A0A096LPK6 155 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 HACD1B0YJ81 288 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 GOLGA8TH3BQL2 631 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 KIF3CO14782 793 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 GSC2O15499 205 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 CYP2B6P20813 491 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 CASP2P42575 452 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PAN2Q504Q3 1202 aaKnown RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 RARS2Q5T160 578 aaKnown RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 DEFB107AQ8IZN7 70 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 BBS5Q8N3I7 341 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 C2orf69Q8N8R5 385 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 C18orf25Q96B23 403 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 CDCA5Q96FF9 252 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 DONSONQ9NYP3 566 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PCDHA11Q9Y5I1 949 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 MAGEA13PA6NCF6 341 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PSMD3O43242 534 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 NOL3O60936 208 aaKnown RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 WFS1O76024 890 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PDE5AO76074 875 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 SH3BGRP55822 239 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 CNGA3Q16281 694 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PDCD2Q16342 344 aaPredicted RBP8.92□□□□□ -0.98
LIG4-204ENST00000611712 SLC30A9Q6PML9 568 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 OR52K1Q8NGK4 314 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PCDH19Q8TAB3 1148 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 CAMKK2Q96RR4 588 aa8.92□□□□□ -0.98
LIG4-204ENST00000611712 PCYT2Q99447 389 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms