RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CD1EP15812 388 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 NCF2P19878 526 aaPredicted RBP15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 TGM2P21980 687 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 SERPINB9P50453 376 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 LSAMPQ13449 338 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 GRM2Q14416 872 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 PPM1JQ5JR12 505 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 PDPK2PQ6A1A2 396 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 SLC9A4Q6AI14 798 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 TIFABQ6ZNK6 161 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 OLFM3Q96PB7 478 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 ACAD9Q9H845 621 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 H3BNX3 289 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 BACE1P56817 501 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 PDK3Q15120 406 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 SURF1Q15526 300 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 CASC4Q6P4E1 433 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 NCAPG2Q86XI2 1143 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 TRIM50Q86XT4 487 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 MAP7D3Q8IWC1 876 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 OXCT2Q9BYC2 517 aaPredicted RBP15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 VCX3BQ9H321 246 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 VCX3AQ9NNX9 186 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 SLC4A7Q9Y6M7 1214 aa15.59■□□□□ 0.09
PCDHGB1-202ENST00000611598 RLFQ13129 1914 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 ZNF195O14628 629 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 STAT5BP51692 787 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 TBL3Q12788 808 aaKnown RBP15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 STXBP2Q15833 593 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 GRAMD1BQ3KR37 738 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 DRAXINQ8NBI3 349 aaPredicted RBP15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 GCNAQ96QF7 691 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 XPNPEP3Q9NQH7 507 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 MAN1C1Q9NR34 630 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 NRBP2Q9NSY0 501 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 ZNF358Q9NW07 568 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 CLIC5Q9NZA1 410 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.09
PCDHGB1-202ENST00000611598 CAPN8A6NHC0 703 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 DCXO43602 365 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 FARP2O94887 1054 aaPredicted RBP15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 PIM1P11309 404 aaPredicted RBP15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 PDK2Q15119 407 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 TMEM132AQ24JP5 1023 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 NMD3Q96D46 503 aaKnown RBP15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 RNPEPQ9H4A4 650 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 PCDHGB4Q9UN71 923 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 PCDHGB5Q9Y5G0 923 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 ANK1P16157 1881 aa15.58■□□□□ 0.08
PCDHGB1-202ENST00000611598 LCTP09848 1927 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZBTB14O43829 449 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 SERPINE1P05121 402 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PYGLP06737 847 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 F7P08709 466 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PROZP22891 400 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ATF7IP2Q5U623 682 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ARMC3Q5W041 872 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 UGT2A3Q6UWM9 527 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PACS1Q6VY07 963 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 SPATA24Q86W54 205 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 C12orf29Q8N999 325 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 NLRP4Q96MN2 994 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PGLYRP2Q96PD5 576 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 SIKE1Q9BRV8 207 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 TEX13BQ9BXU2 312 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 NRDE2Q9H7Z3 1164 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PTPRHQ9HD43 1115 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 TMEM216Q9P0N5 145 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 MFHAS1Q9Y4C4 1052 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 C15orf38-AP3S2A0A0A6YYH1 394 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 INO80B-WBP1J3KQ70 363 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 GLRA3O75311 464 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 PFKMP08237 780 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 SMIM18P0DKX4 95 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 CYP2F1P24903 491 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 TCF7P36402 384 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 FOLH1Q04609 750 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 USP4Q13107 963 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ANKRD20A4Q4UJ75 823 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ARPINQ7Z6K5 226 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 ZBTB8OSQ8IWT0 167 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 NETO2Q8NC67 525 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 JADE3Q92613 823 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 INO80BQ9C086 356 aaPredicted RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 CDT1Q9H211 546 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 STN1Q9H668 368 aaKnown RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 DNAJC28Q9NX36 388 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 TSPAN16Q9UKR8 245 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 INPP5FQ9Y2H2 1132 aa15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 MYO18AQ92614 2054 aaKnown RBP15.57■□□□□ 0.08
PCDHGB1-202ENST00000611598 CSDE1O75534 798 aaKnown RBP15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 VAV1P15498 845 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 TPSB2P20231 275 aa15.56■□□□□ 0.08
PCDHGB1-202ENST00000611598 ICAM3P32942 547 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms