RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CFAP69A5D8W1 941 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 FAM187AA6NFU0 413 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 FBP2O00757 339 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 BIRC5O15392 142 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 ADAM23O75077 832 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 CILPO75339 1184 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 ACLYP53396 1101 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 GRM2Q14416 872 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 PLEKHG4Q58EX7 1191 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
RTN1-209ENST00000611068 METTL25Q8N6Q8 603 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 KLHDC9Q8NEP7 349 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 OR6B3Q8NGW1 331 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 EPB41L1Q9H4G0 881 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 ANGPTL2Q9UKU9 493 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 GRID1Q9ULK0 1009 aa16.49■□□□□ 0.23
RTN1-209ENST00000611068 M0QYV0 167 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 SMIM18P0DKX4 95 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 LMO2P25791 158 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 RGS7P49802 495 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PTPN11Q06124 597 aaPredicted RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 ATP13A4Q4VNC1 1196 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PAN2Q504Q3 1202 aaKnown RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 C9orf57Q5W0N0 161 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 NUP93Q8N1F7 819 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 BEST2Q8NFU1 509 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PTCD3Q96EY7 689 aaKnown RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 PPM1HQ9ULR3 514 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 E9PBE3 544 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 MGEA5O60502 916 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 KPNA6O60684 536 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 SPAG7O75391 227 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 OXSR1O95747 527 aaPredicted RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 HOXD10P28358 340 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 IL9RQ01113 521 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 BCL2A1Q16548 175 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PATL1Q86TB9 770 aaKnown RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 RSPH3Q86UC2 560 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 BBS5Q8N3I7 341 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 ZFP28Q8NHY6 868 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PPP1R10Q96QC0 940 aaKnown RBP16.48■□□□□ 0.23
RTN1-209ENST00000611068 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PADI3Q9ULW8 664 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 TSC22D4Q9Y3Q8 395 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 PCDHA3Q9Y5H8 950 aa16.48■□□□□ 0.23
RTN1-209ENST00000611068 MICAL2O94851 1124 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 TFAP2AP05549 437 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 CYP3A5P20815 502 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 DLG1Q12959 904 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 KYAT1Q16773 422 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 PTPN20Q4JDL3 420 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 SFT2D3Q587I9 215 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 LIN9Q5TKA1 542 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 TMEM214Q6NUQ4 689 aaKnown RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 TTC27Q6P3X3 843 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 C3orf62Q6ZUJ4 267 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 RNF180Q86T96 592 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 PRUNE1Q86TP1 453 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 EMC1Q8N766 993 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 TMEM35BQ8NCS4 154 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 FAM118BQ9BPY3 351 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 PAAF1Q9BRP4 392 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 SENP6Q9GZR1 1112 aaPredicted RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 TAS2R1Q9NYW7 299 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 UVRAGQ9P2Y5 699 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 FAM32AQ9Y421 112 aaKnown RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 TIMM22Q9Y584 194 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 TIMM13Q9Y5L4 95 aaPredicted RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 EDF1O60869 148 aaKnown RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 GRAP2O75791 330 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 MMP8P22894 467 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 SLC5A2P31639 672 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 NADK2Q4G0N4 442 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 PLEKHA5Q9HAU0 1116 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 NPHS2Q9NP85 383 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 SAR1AQ9NR31 198 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 FAM105AQ9NUU6 356 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 NDE1Q9NXR1 346 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
RTN1-209ENST00000611068 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.47■□□□□ 0.23
RTN1-209ENST00000611068 PTGESO14684 152 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 BUD23O43709 281 aaKnown RBP16.46■□□□□ 0.23
RTN1-209ENST00000611068 TFPTP0C1Z6 253 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 P4HA1P13674 534 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 ATICP31939 592 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 TAS2R40P59535 323 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 MED21Q13503 144 aa16.46■□□□□ 0.23
RTN1-209ENST00000611068 DHX34Q14147 1143 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms