RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NFATC3Q12968 1075 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 RAB39AQ14964 217 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 MAPK11Q15759 364 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 ELMOD2Q8IZ81 293 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 LSMEM1Q8N8F7 131 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 BHLHE22Q8NFJ8 381 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-218ENST00000608440 DCAKDQ8WVC6 231 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 KBTBD7Q8WVZ9 684 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 C7orf26Q96N11 449 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 KCNK16Q96T55 309 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-218ENST00000608440 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 STN1Q9H668 368 aaKnown RBP12.93□□□□□ -0.34
CTCFL-218ENST00000608440 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 GDAP2Q9NXN4 497 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 SLC8A2Q9UPR5 921 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 B3GNT3Q9Y2A9 372 aa12.93□□□□□ -0.34
CTCFL-218ENST00000608440 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 EML1O00423 815 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 COPEO14579 308 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 CFLARO15519 480 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 HOXC11O43248 304 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 MARCH6O60337 910 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 GLRA2P23416 452 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 OPRL1P41146 370 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 PKNOX1P55347 436 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 TXNL4AP83876 142 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 MGAT5BQ3V5L5 792 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 CARM1Q86X55 608 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ZC3H3Q8IXZ2 948 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 DCLK2Q8N568 766 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ZSCAN18Q8TBC5 510 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 NPLQ9BXD5 320 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 IKBKGQ9Y6K9 419 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 IRS2Q9Y4H2 1338 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 CENPBD1B2RD01 187 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 USP17L21D6R901 530 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 AIM2O14862 343 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 RNASEH2AO75792 299 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 BBOX1O75936 387 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 BCL10O95999 233 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 IFNB1P01574 187 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 TCN1P20061 433 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 P2RX3P56373 397 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 NEDD8Q15843 81 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 C15orf59Q2T9L4 293 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 LSM14AQ8ND56 463 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 USP13Q92995 863 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 MTMR9Q96QG7 549 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 OSBPL11Q9BXB4 747 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 TDRD1Q9BXT4 1180 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 POLR1BQ9H9Y6 1135 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
CTCFL-218ENST00000608440 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 NOL3O60936 208 aaKnown RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 LYPLA1O75608 230 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 KLHL2O95198 593 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 C8BP07358 591 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 CD1EP15812 388 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 TTC33Q6PID6 262 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 AKAP14Q86UN6 197 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 CDK5RAP1Q96SZ6 601 aaKnown RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 FANCEQ9HB96 536 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 DNMT3BQ9UBC3 853 aaKnown RBP12.91□□□□□ -0.34
CTCFL-218ENST00000608440 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 SLC30A1Q9Y6M5 507 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 DOCK2Q92608 1830 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 MAGEB6P1A0A0J9YX57 407 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 AURKAO14965 403 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 IL4RP24394 825 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 THOP1P52888 689 aa12.91□□□□□ -0.34
CTCFL-218ENST00000608440 DLG4P78352 724 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms