RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 TFAP2DQ7Z6R9 452 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 TRIM48Q8IWZ4 208 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 SIX5Q8N196 739 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 LNX1Q8TBB1 728 aaPredicted RBP5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 FAM71BQ8TC56 605 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ADAMTS19Q8TE59 1207 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ELMO3Q96BJ8 720 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ZMAT2Q96NC0 199 aaKnown RBP5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 TKTL2Q9H0I9 626 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 A0A1B0GUL6 1792 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 A6NNZ2 444 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 GIPC1O14908 333 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 PSMD3O43242 534 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 KDM1AO60341 852 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 CLDN11O75508 207 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 PALMO75781 387 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 MMEP08473 750 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 PFKLP17858 780 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 MAPK8P45983 427 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 NTHL1P78549 312 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 TUBB8Q3ZCM7 444 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 GPR153Q6NV75 609 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ARMC6Q6NXE6 501 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 CHST9Q7L1S5 443 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 C11orf74Q86VG3 221 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ARHGEF19Q8IW93 802 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 CRYBG2Q8N1P7 616 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 RAB42Q8N4Z0 105 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 HMGB4Q8WW32 186 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 FGF13Q92913 245 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 RUNDC3BQ96NL0 473 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 ARHGEF3Q9NR81 526 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 WNT6Q9Y6F9 365 aa5.33□□□□□ -1.56
SCARNA15-201ENST00000607520 PRRC2BQ5JSZ5 2229 aaKnown RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3DA0A087WVF3 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3IA0A087WXS9 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3EA0A087X179 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3KA0A087X1G2 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 SSU72P8A0A1W2PR75 194 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3FA6NER0 549 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3LB9A6J9 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 F8VZ95 297 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DLL1O00548 723 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 ACSL4O60488 711 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3HP0C7X1 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 VCLP18206 1134 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CXCR5P32302 372 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TIE1P35590 1138 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CXCL12P48061 93 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 RUNX3Q13761 415 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 STAT4Q14765 748 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CASP8Q14790 479 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 LLGL1Q15334 1064 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 ARHGAP17Q68EM7 881 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3GQ6DHY5 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3CQ6IPX1 549 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 FAM124AQ86V42 546 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 SLC47A2Q86VL8 602 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBC1D3Q8IZP1 549 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CMTM8Q8IZV2 173 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 UBLCP1Q8WVY7 318 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TBCBQ99426 244 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DUSP9Q99956 384 aaKnown RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 PAAF1Q9BRP4 392 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 KLC2Q9H0B6 622 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 EBF3Q9H4W6 596 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CYLDQ9NQC7 956 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 MTMR10Q9NXD2 777 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CLIC5Q9NZA1 410 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 UBA2Q9UBT2 640 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 SUSD2Q9UGT4 822 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 FBXW11Q9UKB1 542 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 AP4E1Q9UPM8 1137 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 MAD1L1Q9Y6D9 718 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DDX60LQ5H9U9 1706 aaKnown RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TLDC2A0PJX2 215 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 WDR27A2RRH5 827 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 C3orf70A6NLC5 250 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 RBAK-RBAKDNI3L0D1 243 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 KRIT1O00522 736 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 PPEF2O14830 753 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 STAU1O95793 577 aaKnown RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 PAMP19021 973 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 HTR1BP28222 390 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 HOXA9P31269 272 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 ADCY8P40145 1251 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 VPS41P49754 854 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 RGS19P49795 217 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DAB2P98082 770 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 CENPCQ03188 943 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 SOX4Q06945 474 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DSC1Q08554 894 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 PEX6Q13608 980 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 WDR45BQ5MNZ6 344 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 TMCO4Q5TGY1 634 aa5.32□□□□□ -1.56
SCARNA15-201ENST00000607520 DENND1BQ6P3S1 775 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms