RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
PMF1-206ENST00000606952 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
PMF1-206ENST00000606952 RNF157Q96PX1 679 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
PMF1-206ENST00000606952 KLHL11Q9NVR0 708 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 DOCK4Q8N1I0 1966 aa17.11■□□□□ 0.33
PMF1-206ENST00000606952 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CCDC195A0A1B0GUA6 201 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 SLC12A8A0AV02 714 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CTAGE15A4D2H0 777 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 PI4K2BG5E9Z4 385 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CCDC188H7C350 402 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 LATS1O95835 1130 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 APOEP02649 317 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CD48P09326 243 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CTAGE8P0CG41 777 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 WEE1P30291 646 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CCR2P41597 374 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 ODF2Q5BJF6 829 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 TCEAL5Q5H9L2 206 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 SLC9A4Q6AI14 798 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 PDZD4Q76G19 769 aaPredicted RBP17.1■□□□□ 0.33
PMF1-206ENST00000606952 CTAGE6Q86UF2 777 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CCDC50Q8IVM0 306 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CTAGE4Q8IX94 777 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 ZDHHC14Q8IZN3 488 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 ATP6V0D2Q8N8Y2 350 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 C12orf50Q8NA57 414 aaPredicted RBP17.1■□□□□ 0.33
PMF1-206ENST00000606952 SPATA4Q8NEY3 305 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 BTN2A3PQ96KV6 586 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 CARD6Q9BX69 1037 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 SMARCAL1Q9NZC9 954 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
PMF1-206ENST00000606952 H3BRJ5 948 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 SOX1O00570 391 aaPredicted RBP17.09■□□□□ 0.33
PMF1-206ENST00000606952 NRG2O14511 850 aaPredicted RBP17.09■□□□□ 0.33
PMF1-206ENST00000606952 ZNF197O14709 1029 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 TJP3O95049 919 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 SRGAP2BP0DMP2 458 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 TCF3P15923 654 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
PMF1-206ENST00000606952 TUBB4BP68371 445 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 KRT81Q14533 505 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 LONRF2Q1L5Z9 754 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 MIB1Q86YT6 1006 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 UNC45BQ8IWX7 931 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 PRMT1Q99873 361 aaKnown RBP17.09■□□□□ 0.33
PMF1-206ENST00000606952 FRMD8P1Q9BZ68 369 aaPredicted RBP17.09■□□□□ 0.33
PMF1-206ENST00000606952 ATXN3LQ9H3M9 355 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 TMPRSS4Q9NRS4 437 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
PMF1-206ENST00000606952 STOML2Q9UJZ1 356 aa17.09■□□□□ 0.33
PMF1-206ENST00000606952 A0A1W2PRU2 124 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PAGE1O75459 146 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 STC2O76061 302 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 MYL4P12829 197 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 HOXB8P17481 243 aaPredicted RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 ARL4AP40617 200 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 MLLT6P55198 1093 aaPredicted RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 CYP4F8P98187 520 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 ADAM15Q13444 863 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 DPYSQ14117 519 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 TFDP2Q14188 446 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 SLC5A9Q2M3M2 681 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 C5orf22Q49AR2 442 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PIK3R6Q5UE93 754 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 TXNDC8Q6A555 127 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 ANKRD54Q6NXT1 300 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 DRICH1Q6PGQ1 229 aaPredicted RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 GPR149Q86SP6 731 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 ZNF683Q8IZ20 524 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PYROXD2Q8N2H3 581 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PQLC3Q8N755 202 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PRELID2Q8N945 189 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PCDH19Q8TAB3 1148 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 RNF34Q969K3 372 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 CALN1Q9BXU9 219 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 TASP1Q9H6P5 420 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 SLC12A6Q9UHW9 1150 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 MTCH2Q9Y6C9 303 aa17.08■□□□□ 0.32
PMF1-206ENST00000606952 PRRC2BQ5JSZ5 2229 aaKnown RBP17.08■□□□□ 0.32
PMF1-206ENST00000606952 IGLV3-10A0A075B6K4 115 aa17.07■□□□□ 0.32
PMF1-206ENST00000606952 TRAV19A0A0A6YYK7 116 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms