RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 LRRC57Q8N9N7 239 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 KIAA1524Q8TCG1 905 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 RSAD2Q8WXG1 361 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 PLD4Q96BZ4 506 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 PLA2G2FQ9BZM2 168 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 TKTL2Q9H0I9 626 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 KIF9Q9HAQ2 790 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 TRPV4Q9HBA0 871 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 GPATCH2LQ9NWQ4 482 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 EPS15L1Q9UBC2 864 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 XPO7Q9UIA9 1087 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 AGO1Q9UL18 857 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 FAM50BQ9Y247 325 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 ZKSCAN5Q9Y2L8 839 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 NR2E1Q9Y466 385 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 SNX10Q9Y5X0 201 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 WNT6Q9Y6F9 365 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 ZFP37Q9Y6Q3 630 aaPredicted RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 NUMBLQ9Y6R0 609 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 GOLGA6L7A0A1B0GV03 622 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 E2F8A0AVK6 867 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 KCNU1A8MYU2 1149 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ANHXE9PGG2 379 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 SPOPO43791 374 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PRPSAP2O60256 369 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PAGE1O75459 146 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 FTCDO95954 541 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 TNNT1P13805 278 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 TCF3P15923 654 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 COMTP21964 271 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 IL1R2P27930 398 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PCK1P35558 622 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 MARCKSL1P49006 195 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 HARS2P49590 506 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 VCPP55072 806 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 GRM2Q14416 872 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ACAP1Q15027 740 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 IFI16Q16666 785 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 CA9Q16790 459 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 AAK1Q2M2I8 961 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 SMTNL2Q2TAL5 461 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 HS1BP3Q53T59 392 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 KCNT1Q5JUK3 1230 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 BRMS1LQ5PSV4 323 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PIK3R6Q5UE93 754 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 NUGGCQ68CJ6 796 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 NADSYN1Q6IA69 706 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 Q6ZNB5 142 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 MTSS1LQ765P7 747 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 DDX42Q86XP3 938 aaKnown RBP eCLIP7.97□□□□□ -1.13
MSH6-211ENST00000606499 DENND1CQ8IV53 801 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PYROXD2Q8N2H3 581 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 RNF10Q8N5U6 811 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 BPIFB1Q8TDL5 484 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ELSPBP1Q96BH3 223 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 MYEOVQ96EZ4 313 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ZFYVE19Q96K21 471 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 BTN2A3PQ96KV6 586 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 RPP25Q9BUL9 199 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 SNRNP25Q9BV90 132 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 MAGEB5Q9BZ81 275 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 WDCPQ9H6R7 721 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ZWILCHQ9H900 591 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ZFP14Q9HCL3 533 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 KLHL11Q9NVR0 708 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.97□□□□□ -1.13
MSH6-211ENST00000606499 ARHGEF38Q9NXL2 777 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 LCMT1Q9UIC8 334 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 LSM7Q9UK45 103 aaKnown RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 USP18Q9UMW8 372 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 PACSIN2Q9UNF0 486 aaPredicted RBP7.97□□□□□ -1.13
MSH6-211ENST00000606499 AP4E1Q9UPM8 1137 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 SH3BP1Q9Y3L3 701 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 ALG6Q9Y672 507 aa7.97□□□□□ -1.13
MSH6-211ENST00000606499 MIA3Q5JRA6 1907 aa7.96□□□□□ -1.13
MSH6-211ENST00000606499 LOC730098B7Z3J9 87 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FAM72CH0Y354 149 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 TRDMT1O14717 391 aaKnown RBP7.96□□□□□ -1.14
MSH6-211ENST00000606499 ACSL4O60488 711 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 TSPAN3O60637 253 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ECI2O75521 394 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ASGR2P07307 311 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 RARAP10276 462 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SLC2A3P11169 496 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SLC6A4P31645 630 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ADRA1BP35368 520 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SLC11A2P49281 568 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SGSHP51688 502 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ZP2Q05996 745 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FCHO2Q0JRZ9 810 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 SCAPQ12770 1279 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 ATP13A4Q4VNC1 1196 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FAM133BQ5BKY9 247 aaKnown RBP7.96□□□□□ -1.14
MSH6-211ENST00000606499 MS4A13Q5J8X5 152 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 EFHC2Q5JST6 749 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 FAM72AQ5TYM5 149 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 RAP1GAP2Q684P5 730 aa7.96□□□□□ -1.14
MSH6-211ENST00000606499 TRIM68Q6AZZ1 485 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms