RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 FAM193AP78312 1265 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 ARID5AQ03989 594 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 LRMPQ12912 555 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 EIF4HQ15056 248 aaKnown RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 E2F5Q15329 346 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 MPPE1Q53F39 396 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 BSPRYQ5W0U4 402 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 TMEM215Q68D42 235 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 CACUL1Q86Y37 369 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 SIX6OS1Q8N1H7 587 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 RNF139Q8WU17 664 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 EDEM1Q92611 657 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 PRCCQ92733 491 aaPredicted RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 GATA6Q92908 595 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 SIPA1Q96FS4 1042 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 GSDMAQ96QA5 445 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 SFMBT1Q9UHJ3 866 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 HBS1LQ9Y450 684 aaKnown RBP13.75□□□□□ -0.21
RPS28-204ENST00000602140 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
RPS28-204ENST00000602140 AKAP13Q12802 2813 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 YJEFN3A6XGL0 299 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 MEI4A8MW99 385 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 E7ENQ6 273 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 O00370 1275 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 TIMM44O43615 452 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 SMC2O95347 1197 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 EPHX1P07099 455 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 ACADMP11310 421 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
RPS28-204ENST00000602140 COPAP53621 1224 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 LRRC63Q05C16 580 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 SERPINA13PQ6UXR4 307 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 UBR7Q8N806 425 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 KDF1Q8NAX2 398 aaPredicted RBP13.74□□□□□ -0.21
RPS28-204ENST00000602140 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 KCTD13Q8WZ19 329 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 SLC35C1Q96A29 364 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 ABCC13Q9NSE7 274 aa13.74□□□□□ -0.21
RPS28-204ENST00000602140 ZZEF1O43149 2961 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 WDFY3Q8IZQ1 3526 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
RPS28-204ENST00000602140 SH3BP5O60239 455 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 GJB3O75712 270 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 HLA-EP13747 358 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 LCP1P13796 627 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 TBXAS1P24557 533 aaPredicted RBP13.73□□□□□ -0.21
RPS28-204ENST00000602140 HLA-FP30511 346 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 OXTRP30559 389 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 DAOAP59103 153 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 GRIK2Q13002 908 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 ADGRF1Q5T601 910 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 DCAF12L1Q5VU92 463 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 ZCCHC9Q8N567 271 aaKnown RBP13.73□□□□□ -0.21
RPS28-204ENST00000602140 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 SMARCE1Q969G3 411 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 TMA16Q96EY4 203 aaKnown RBP13.73□□□□□ -0.21
RPS28-204ENST00000602140 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 MIR1-1HGQ9H1L0 117 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 RALYQ9UKM9 306 aaKnown RBP13.73□□□□□ -0.21
RPS28-204ENST00000602140 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 KIAA1257Q9ULG3 409 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 NEUROG3Q9Y4Z2 214 aa13.73□□□□□ -0.21
RPS28-204ENST00000602140 TMEM8BA6NDV4 472 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 PIK3R2O00459 728 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 RDXP35241 583 aaKnown RBP13.72□□□□□ -0.21
RPS28-204ENST00000602140 FMO5P49326 533 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 RGS7P49802 495 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 ZNF445P59923 1031 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
RPS28-204ENST00000602140 FNDC3BQ53EP0 1204 aaKnown RBP13.72□□□□□ -0.21
RPS28-204ENST00000602140 ISM2Q6H9L7 571 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 LCLAT1Q6UWP7 414 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 CHST9Q7L1S5 443 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 FAM124AQ86V42 546 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 CHCHD4Q8N4Q1 142 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 ENGASEQ8NFI3 743 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 OR2T3Q8NH03 318 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 CYB5D2Q8WUJ1 264 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 SLC35F5Q8WV83 523 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 ZDHHC5Q9C0B5 715 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 METTL14Q9HCE5 456 aaKnown RBP13.72□□□□□ -0.21
RPS28-204ENST00000602140 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 STOML2Q9UJZ1 356 aa13.72□□□□□ -0.21
RPS28-204ENST00000602140 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms