RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SLC35F5Q8WV83 523 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 EDEM1Q92611 657 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 NT5C1BQ96P26 610 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 GTPBP2Q9BX10 602 aaKnown RBP17.75■□□□□ 0.43
SCAF1-204ENST00000601038 FSCN3Q9NQT6 498 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 ABCC13Q9NSE7 274 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 USP36Q9P275 1121 aaKnown RBP17.75■□□□□ 0.43
SCAF1-204ENST00000601038 STOML2Q9UJZ1 356 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 LATS1O95835 1130 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 SYPP08247 313 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 BECN1Q14457 450 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 WDR45BQ5MNZ6 344 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 ADGRF1Q5T601 910 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 TMEM215Q68D42 235 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 TMEM270Q6UE05 265 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 PIP4P1Q86T03 277 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 TMPRSS6Q8IU80 811 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 RGL4Q8IZJ4 473 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 TFAP2BQ92481 460 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 CIPCQ9C0C6 399 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 WSB2Q9NYS7 404 aaPredicted RBP17.74■□□□□ 0.43
SCAF1-204ENST00000601038 SUSD2Q9UGT4 822 aa17.74■□□□□ 0.43
SCAF1-204ENST00000601038 CHD8Q9HCK8 2581 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 ADAMTS9Q9P2N4 1935 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 P4HA2O15460 535 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 OPHN1O60890 802 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 NCAM1P13591 858 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 LCP1P13796 627 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 GNSP15586 552 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 CD44P16070 742 aaKnown RBP17.73■□□□□ 0.43
SCAF1-204ENST00000601038 HOXD9P28356 352 aaPredicted RBP17.73■□□□□ 0.43
SCAF1-204ENST00000601038 DAOAP59103 153 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 CETN1Q12798 172 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 CNGA2Q16280 664 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 CCDC40Q4G0X9 1142 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 ISM2Q6H9L7 571 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 MINDY1Q8N5J2 469 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 LMO3Q8TAP4 145 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 SORCS1Q8WY21 1168 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 TMA16Q96EY4 203 aaKnown RBP17.73■□□□□ 0.43
SCAF1-204ENST00000601038 SIPA1Q96FS4 1042 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 TOE1Q96GM8 510 aaKnown RBP17.73■□□□□ 0.43
SCAF1-204ENST00000601038 MAN1B1Q9UKM7 699 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 NFE2L3Q9Y4A8 694 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 PCDHB4Q9Y5E5 795 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 PCDH15Q96QU1 1955 aa17.73■□□□□ 0.43
SCAF1-204ENST00000601038 KMT2BQ9UMN6 2715 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-204ENST00000601038 RNF225M0QZC1 329 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-204ENST00000601038 TSPAN3O60637 253 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 GABBR2O75899 941 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PROS1P07225 676 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PRKCHP24723 683 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 HLA-FP30511 346 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 OXTRP30559 389 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 TPMTP51580 245 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 ARID5AQ03989 594 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 STILQ15468 1287 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PLEKHG6Q3KR16 790 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 TTI2Q6NXR4 508 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PMF1Q6P1K2 205 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 MSANTD2Q6P1R3 559 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 FOXR2Q6PJQ5 311 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 SERPINA13PQ6UXR4 307 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PPM1KQ8N3J5 372 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 CADM4Q8NFZ8 388 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 DNASE2BQ8WZ79 361 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 IRGQQ8WZA9 623 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 PRCCQ92733 491 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-204ENST00000601038 ZSWIM1Q9BR11 485 aa17.72■□□□□ 0.43
SCAF1-204ENST00000601038 DNAAF2Q9NVR5 837 aaKnown RBP17.72■□□□□ 0.43
SCAF1-204ENST00000601038 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCAF1-204ENST00000601038 KCNJ18B7U540 433 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 MSI1O43347 362 aaKnown RBP17.71■□□□□ 0.43
SCAF1-204ENST00000601038 IGLV3-19P01714 112 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 EPHX1P07099 455 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 MAOBP27338 520 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 RGS7P49802 495 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 COPAP53621 1224 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 WFIKKN2Q8TEU8 576 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 HSFY1Q96LI6 401 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 NUP58Q9BVL2 599 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 GPR174Q9BXC1 333 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 IRX2Q9BZI1 471 aaPredicted RBP17.71■□□□□ 0.43
SCAF1-204ENST00000601038 PLA2G4CQ9UP65 541 aa17.71■□□□□ 0.43
SCAF1-204ENST00000601038 CKAP5Q14008 2032 aa17.71■□□□□ 0.42
SCAF1-204ENST00000601038 BICDL2A1A5D9 508 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 M0QYV0 167 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 TOP3BO95985 862 aaKnown RBP17.7■□□□□ 0.42
SCAF1-204ENST00000601038 IGLV3-27P01718 113 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 ACADMP11310 421 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 CD59P13987 128 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 SPINK2P20155 84 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 GCNT1Q02742 428 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 SLC14A1Q13336 389 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 CAMK2GQ13555 558 aaPredicted RBP17.7■□□□□ 0.42
SCAF1-204ENST00000601038 MPP7Q5T2T1 576 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 NUGGCQ68CJ6 796 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 KLHL10Q6JEL2 608 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms