RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SLC7A9P82251 487 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 CMTM8Q8IZV2 173 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 SMRP1Q8NCR6 262 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 COG1Q8WTW3 980 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 RSPRY1Q96DX4 576 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 MYEOVQ96EZ4 313 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 CDK5RAP1Q96SZ6 601 aaKnown RBP23.81■■□□□ 1.4
IRF3-227ENST00000600911 POMKQ9H5K3 350 aa23.81■■□□□ 1.4
IRF3-227ENST00000600911 TRAV19A0A0A6YYK7 116 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 PYGMP11217 842 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 NNTQ13423 1086 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 ERMARDQ5T6L9 678 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 PIK3R6Q5UE93 754 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 PAPD7Q5XG87 772 aaKnown RBP23.8■■□□□ 1.4
IRF3-227ENST00000600911 FGF13Q92913 245 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 USP13Q92995 863 aaPredicted RBP23.8■■□□□ 1.4
IRF3-227ENST00000600911 RNF34Q969K3 372 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 NTAN1Q96AB6 310 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 RNF25Q96BH1 459 aaPredicted RBP23.8■■□□□ 1.4
IRF3-227ENST00000600911 SLITRK6Q9H5Y7 841 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.8■■□□□ 1.4
IRF3-227ENST00000600911 SMARCAL1Q9NZC9 954 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 SNX12Q9UMY4 172 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 AP4E1Q9UPM8 1137 aa23.8■■□□□ 1.4
IRF3-227ENST00000600911 HBS1LQ9Y450 684 aaKnown RBP23.8■■□□□ 1.4
IRF3-227ENST00000600911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.79■■□□□ 1.4
IRF3-227ENST00000600911 GOLGA6L7A0A1B0GV03 622 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 GRXCR2A6NFK2 248 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 ZNF197O14709 1029 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 CCR1P32246 355 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 ITIH3Q06033 890 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 MMRN1Q13201 1228 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 PPP2R5DQ14738 602 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 HADHQ16836 314 aaKnown RBP23.79■■□□□ 1.4
IRF3-227ENST00000600911 LRRC38Q5VT99 294 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 NADSYN1Q6IA69 706 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 POLNQ7Z5Q5 900 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 TADA2BQ86TJ2 420 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 KATNAL2Q8IYT4 538 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 TTC16Q8NEE8 873 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 LRRC3BQ96PB8 259 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 MYADMQ96S97 322 aa23.79■■□□□ 1.4
IRF3-227ENST00000600911 CCDC66A2RUB6 948 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 CTAGE9A4FU28 777 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 MIF4GDA9UHW6 222 aaKnown RBP23.78■■□□□ 1.4
IRF3-227ENST00000600911 KCNK3O14649 394 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 PAGE1O75459 146 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 KRT1P04264 644 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 L1CAMP32004 1257 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 SCAPQ12770 1279 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 ARHGAP15Q53QZ3 475 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 MFSD7Q6UXD7 560 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 C14orf80Q86SX3 495 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 OSBPL9Q96SU4 736 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 DHX35Q9H5Z1 703 aaKnown RBP23.78■■□□□ 1.4
IRF3-227ENST00000600911 PCDH18Q9HCL0 1135 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.78■■□□□ 1.43e-8■□□□□ 10.2
IRF3-227ENST00000600911 USP15Q9Y4E8 981 aaPredicted RBP23.78■■□□□ 1.4
IRF3-227ENST00000600911 HS3ST4Q9Y661 456 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 DOCK4Q8N1I0 1966 aa23.78■■□□□ 1.4
IRF3-227ENST00000600911 KCNA5P22460 613 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 IL4RP24394 825 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 RING1Q06587 406 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 ADCY2Q08462 1091 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 BRMS1LQ5PSV4 323 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 ATAT1Q5SQI0 421 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 SND1Q7KZF4 910 aaKnown RBP eCLIP23.77■■□□□ 1.4
IRF3-227ENST00000600911 ARID3BQ8IVW6 561 aaPredicted RBP23.77■■□□□ 1.4
IRF3-227ENST00000600911 TEKT4Q8WW24 435 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 P2RY11Q96G91 374 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 MS4A14Q96JA4 679 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 UBE2ZQ9H832 354 aaPredicted RBP23.77■■□□□ 1.4
IRF3-227ENST00000600911 LEFTY2O00292 366 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 KDELR1P24390 212 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 DDX6P26196 483 aaKnown RBP eCLIP23.77■■□□□ 1.4
IRF3-227ENST00000600911 CORO1AP31146 461 aaKnown RBP23.77■■□□□ 1.4
IRF3-227ENST00000600911 IRAK1P51617 712 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 RWDD2BP57060 319 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 SEMA3BQ13214 749 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 BOLA3Q53S33 107 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 CES5AQ6NT32 575 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 DENND1CQ8IV53 801 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 ZSCAN18Q8TBC5 510 aaPredicted RBP23.77■■□□□ 1.4
IRF3-227ENST00000600911 SUSD6Q92537 303 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 CFAP97Q9P2B7 532 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 CD207Q9UJ71 328 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 ARHGAP26Q9UNA1 814 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 NEU3Q9UQ49 428 aa23.77■■□□□ 1.4
IRF3-227ENST00000600911 MYOFQ9NZM1 2061 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 KIF26AQ9ULI4 1882 aaPredicted RBP23.76■■□□□ 1.39
IRF3-227ENST00000600911 LRRD1A4D1F6 860 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 KRT7P08729 469 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 DESP17661 470 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 SLC6A4P31645 630 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 CDH6P55285 790 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 COG7P83436 770 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 DPYSL3Q14195 570 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 SKIV2LQ15477 1246 aaKnown RBP23.76■■□□□ 1.39
IRF3-227ENST00000600911 DPYSL2Q16555 572 aa23.76■■□□□ 1.39
IRF3-227ENST00000600911 MS4A13Q5J8X5 152 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms