RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PI15O43692 258 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 LCA5LO95447 670 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 CYP1A2P05177 515 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 SLC6A4P31645 630 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 SLC6A11P48066 632 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 HARS2P49590 506 aaKnown RBP14.28□□□□□ -0.12
VRK3-219ENST00000600137 SULT1E1P49888 294 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
VRK3-219ENST00000600137 ADGRF1Q5T601 910 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 TPRG1Q6ZUI0 275 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 VPS36Q86VN1 386 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 C12orf40Q86WS4 652 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 RALGPS2Q86X27 583 aaPredicted RBP14.28□□□□□ -0.12
VRK3-219ENST00000600137 ETFBKMTQ8IXQ9 262 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 PHTF2Q8N3S3 785 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 ARFGAP1Q8N6T3 406 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 SPC24Q8NBT2 197 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 EZH1Q92800 747 aaPredicted RBP14.28□□□□□ -0.12
VRK3-219ENST00000600137 PRMT1Q99873 361 aaKnown RBP14.28□□□□□ -0.12
VRK3-219ENST00000600137 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 THAP2Q9H0W7 228 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 SPTLC3Q9NUV7 552 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 PARVAQ9NVD7 372 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 ARHGEF38Q9NXL2 777 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
VRK3-219ENST00000600137 SYNJ2BP-COX16A0A087WUM0 186 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 FAM86C2PA6NEL3 165 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 TRDMT1O14717 391 aaKnown RBP14.27□□□□□ -0.13
VRK3-219ENST00000600137 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.13
VRK3-219ENST00000600137 CHRM1P11229 460 aaPredicted RBP14.27□□□□□ -0.13
VRK3-219ENST00000600137 ABCB4P21439 1286 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 GPD1P21695 349 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 GBP1P32455 592 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 GALK1P51570 392 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 SGSHP51688 502 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.13
VRK3-219ENST00000600137 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.13
VRK3-219ENST00000600137 HDAC4P56524 1084 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 NME3Q13232 169 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 PIK3R6Q5UE93 754 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 CPA6Q8N4T0 437 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 ZNF653Q96CK0 615 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 CCDC42Q96M95 316 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 MCEEQ96PE7 176 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 MAGEB5Q9BZ81 275 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 FOXQ1Q9C009 403 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 FAM204AQ9H8W3 233 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 TBC1D17Q9HA65 648 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 LTB4R2Q9NPC1 389 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 TMPRSS4Q9NRS4 437 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 COX16Q9P0S2 106 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 DLGAP2Q9P1A6 1054 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 STAP1Q9ULZ2 295 aa14.27□□□□□ -0.13
VRK3-219ENST00000600137 A0A0A0MRY4 1105 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 KANSL1LA0AUZ9 987 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 GOLGA6L3A6NEY3 463 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ANTXRLA6NF34 631 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 MAN2B1O00754 1011 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 TRIM24O15164 1050 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 CCP110O43303 1012 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 AKR1B10O60218 316 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 F9P00740 461 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 CISD3P0C7P0 127 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 MYBL1P10243 752 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ADH5P11766 374 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 TARSP26639 723 aaKnown RBP14.26□□□□□ -0.13
VRK3-219ENST00000600137 SDC4P31431 198 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 CCR1P32246 355 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 CHKAP35790 457 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ATP11AP98196 1134 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 GAD2Q05329 585 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 DEUP1Q05D60 604 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 NR1H3Q13133 447 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
VRK3-219ENST00000600137 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 TPGS1Q6ZTW0 290 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 STRADAQ7RTN6 431 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ZNF683Q8IZ20 524 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 FAM3CQ92520 227 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 MSANTD3Q96H12 275 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 SHDQ96IW2 340 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 CNPY3Q9BT09 278 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 KIAA1549LQ6ZVL6 1849 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ATG2BQ96BY7 2078 aa14.26□□□□□ -0.13
VRK3-219ENST00000600137 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 SOWAHDA6NJG2 315 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 CACNG3O60359 315 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 TSPAN3O60637 253 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 PAGE1O75459 146 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 ADH1CP00326 375 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 SLC2A3P11169 496 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms