RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 CAPN9O14815 690 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 EPHB6O15197 1021 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ACSL4O60488 711 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 HSF2BPO75031 334 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 DAB1O75553 588 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 RPP40O75818 363 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 KLF8O95600 359 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 LSM8O95777 96 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 CDK11BP21127 795 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 JAM2P57087 298 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 YWHAZP63104 245 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 EIF4EBP2Q13542 120 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 SIM2Q14190 667 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 SYCP1Q15431 976 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 GEN1Q17RS7 908 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 MPPE1Q53F39 396 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 FAM133BQ5BKY9 247 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 EMC10Q5UCC4 262 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 SYPL2Q5VXT5 272 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 EGFLAMQ63HQ2 1017 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ANO7Q6IWH7 933 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 OLFML1Q6UWY5 402 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 PRR23BQ6ZRT6 265 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 FAM183BPQ6ZVS7 135 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 SLC26A9Q7LBE3 791 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 NOP9Q86U38 636 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 UNC45BQ8IWX7 931 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 DCLK2Q8N568 766 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 TMEM35BQ8NCS4 154 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ZNF397Q8NF99 534 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 MDGA1Q8NFP4 955 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 OLIG1Q8TAK6 271 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 IPO4Q8TEX9 1081 aaKnown RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 PRICKLE1Q96MT3 831 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 SLC2A11Q9BYW1 496 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 CD248Q9HCU0 757 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 ZDHHC4Q9NPG8 344 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 FAM207AQ9NSI2 230 aaPredicted RBP8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 GMEB2Q9UKD1 530 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 GPR179Q6PRD1 2367 aa8.3□□□□□ -1.08
CHMP2A-205ENST00000600006 RIF1Q5UIP0 2472 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 TRUB2O95900 331 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 TPM3P06753 285 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 RETP07949 1114 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ATP1A3P13637 1013 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 HOXB2P14652 356 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NTSR1P30989 418 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SLC6A4P31645 630 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SOX5P35711 763 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SCNN1AP37088 669 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 GABRB2P47870 512 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SLC11A2P49281 568 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SGSHP51688 502 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 SNX16P57768 344 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 POLR2FP61218 127 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NOMO3P69849 1222 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 PITX1P78337 314 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ENPP2Q13822 863 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 TAF5Q15542 800 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 LPAL2Q16609 132 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 FILIP1LQ4L180 1135 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 MPP7Q5T2T1 576 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 PIK3R6Q5UE93 754 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 CEP68Q76N32 757 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ANKS1BQ7Z6G8 1248 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ZNF677Q86XU0 584 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 DEFB106AQ8N104 65 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NEK11Q8NG66 645 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ADAM32Q8TC27 787 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 DDI1Q8WTU0 396 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ZC3H10Q96K80 434 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 ACOX2Q99424 681 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 GABRG3Q99928 467 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 DDX50Q9BQ39 737 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 HINFPQ9BQA5 517 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 TPSD1Q9BZJ3 242 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NLRC4Q9NPP4 1024 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 NOCTQ9UK39 431 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 CLEC4EQ9ULY5 219 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 RALGAPA1Q6GYQ0 2036 aa8.29□□□□□ -1.08
CHMP2A-205ENST00000600006 GOLGA6L7A0A1B0GV03 622 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 A0A1W2PQF6 199 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 TCRBV21S2A2A0A5A6 115 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 NPC1O15118 1278 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 TSPAN3O60637 253 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 LRP3O75074 770 aa8.28□□□□□ -1.08
CHMP2A-205ENST00000600006 ALDH1A2O94788 518 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms