RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TMEFF1Q8IYR6 380 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 FRMD1Q8N878 549 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 SLC4A5Q9BY07 1137 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 RXFP3Q9NSD7 469 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 CLEC4EQ9ULY5 219 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 DNAH14Q0VDD8 3507 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 KHNYNO15037 678 aaKnown RBP23.97■■□□□ 1.43
SSBP4-205ENST00000598159 AP5Z1O43299 807 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 THAP12O43422 761 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 TSPAN3O60637 253 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 IGLV3-27P01718 113 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 PON1P27169 355 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 DPP6P42658 865 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 TBX4P57082 545 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 ENPP2Q13822 863 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 ARHGAP44Q17R89 818 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 STPG1Q5TH74 334 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 DENND1BQ6P3S1 775 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 GJB7Q6PEY0 223 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 TMEM110Q86TL2 294 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 TRIM62Q9BVG3 475 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 CALCOCO1Q9P1Z2 691 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 RAD54BQ9Y620 910 aa23.97■■□□□ 1.43
SSBP4-205ENST00000598159 IRAK2O43187 625 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 FYNP06241 537 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 NDUFV2P19404 249 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 HOXD9P28356 352 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-205ENST00000598159 USP8P40818 1118 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 STARD3Q14849 445 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 MAN2A1Q16706 1144 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 MPP7Q5T2T1 576 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 PIGKQ92643 395 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 NUP62CLQ9H1M0 184 aa23.96■■□□□ 1.43
SSBP4-205ENST00000598159 BECN2A8MW95 431 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 TM4SF5O14894 197 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 ACSL4O60488 711 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 PRKCSHP14314 528 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-205ENST00000598159 ARID5AQ03989 594 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 NNTQ13423 1086 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 CT47A1Q5JQC4 288 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-205ENST00000598159 RNF43Q68DV7 783 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 TCEAL6Q6IPX3 200 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 SHC3Q92529 594 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 TCEAL3Q969E4 200 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 FAM149B1Q96BN6 582 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 MRGPRX1Q96LB2 322 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 SERPINB11Q96P15 392 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 DDX50Q9BQ39 737 aaKnown RBP23.95■■□□□ 1.42
SSBP4-205ENST00000598159 TLR6Q9Y2C9 796 aa23.95■■□□□ 1.42
SSBP4-205ENST00000598159 CEP192Q8TEP8 1941 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 CAPN9O14815 690 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 IL12RB1P42701 662 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 RPL6Q02878 288 aaKnown RBP23.94■■□□□ 1.42
SSBP4-205ENST00000598159 PTK2Q05397 1052 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 ZNF234Q14588 700 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 DPCR1Q3MIW9 517 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 PIK3R6Q5UE93 754 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 METTL3Q86U44 580 aaKnown RBP23.94■■□□□ 1.42
SSBP4-205ENST00000598159 SYT12Q8IV01 421 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 ZNF557Q8N988 423 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-205ENST00000598159 WFIKKN2Q8TEU8 576 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 CIPCQ9C0C6 399 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 NDST4Q9H3R1 872 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 ACP6Q9NPH0 428 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 EVLQ9UI08 416 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-205ENST00000598159 NAALADL1Q9UQQ1 740 aa23.94■■□□□ 1.42
SSBP4-205ENST00000598159 IGHV1OR15-9A0A0B4J2B8 117 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 SYNCRIPO60506 623 aaKnown RBP23.93■■□□□ 1.42
SSBP4-205ENST00000598159 PTGER3P43115 390 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 VWA3BQ502W6 1294 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 PPM1JQ5JR12 505 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 LYSMD4Q5XG99 296 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 TMEM215Q68D42 235 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 KIAA0907Q7Z7F0 614 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-205ENST00000598159 DQX1Q8TE96 717 aaKnown RBP23.93■■□□□ 1.42
SSBP4-205ENST00000598159 EDEM2Q9BV94 578 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 POPDC2Q9HBU9 364 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 CYTH4Q9UIA0 394 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 PLA2G4CQ9UP65 541 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 GON4LQ3T8J9 2241 aa23.93■■□□□ 1.42
SSBP4-205ENST00000598159 GOLGA6L7A0A1B0GV03 622 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 E5RJQ4 531 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 PAPSS1O43252 624 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-205ENST00000598159 HLA-FP30511 346 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 HOXD12P35452 270 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 YWHAZP63104 245 aaKnown RBP23.92■■□□□ 1.42
SSBP4-205ENST00000598159 IRX4P78413 519 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 APBA1Q02410 837 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 FUT11Q495W5 492 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 SYPL2Q5VXT5 272 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 RFWD3Q6PCD5 774 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 ARMCX6Q7L4S7 300 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.92■■□□□ 1.422e-7■■■□□ 16.4
SSBP4-205ENST00000598159 ERLEC1Q96DZ1 483 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 SLC39A13Q96H72 371 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 FCRL2Q96LA5 508 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-205ENST00000598159 TUBGCP2Q9BSJ2 902 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 LHX5Q9H2C1 402 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 PRDM16Q9HAZ2 1276 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 SIX2Q9NPC8 291 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms