RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RHBDD1Q8TEB9 315 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 HNRNPLLQ8WVV9 542 aaKnown RBP10.44□□□□□ -0.74
LIG1-209ENST00000596104 FOXD4L4Q8WXT5 416 aaPredicted RBP10.44□□□□□ -0.74
LIG1-209ENST00000596104 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
LIG1-209ENST00000596104 UBXN6Q9BZV1 441 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 IMPG2Q9BZV3 1241 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 CIPCQ9C0C6 399 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 TMEM245Q9H330 911 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 C6orf106Q9H6K1 298 aaPredicted RBP10.44□□□□□ -0.74
LIG1-209ENST00000596104 OSGEPQ9NPF4 335 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 FRMD4BQ9Y2L6 1034 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.44□□□□□ -0.74
LIG1-209ENST00000596104 ACACAQ13085 2346 aa10.44□□□□□ -0.74
LIG1-209ENST00000596104 IGSF10Q6WRI0 2623 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 PDIA4P13667 645 aaKnown RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 HLA-FP30511 346 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 AFF3P51826 1226 aaKnown RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 MCCD1P59942 119 aaPredicted RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 YWHAGP61981 247 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG1-209ENST00000596104 ENPEPQ07075 957 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 NFIL3Q16649 462 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 PTPRNQ16849 979 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 FOXD4L6Q3SYB3 417 aaPredicted RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 ZNF394Q53GI3 561 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 ARHGAP17Q68EM7 881 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 PM20D1Q6GTS8 502 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 FOXD4L3Q6VB84 417 aaPredicted RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 INTS8Q75QN2 995 aaKnown RBP10.43□□□□□ -0.74
LIG1-209ENST00000596104 FAM124AQ86V42 546 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 ARHGAP18Q8N392 663 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG1-209ENST00000596104 SLC4A11Q8NBS3 891 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 DDI1Q8WTU0 396 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 PLD4Q96BZ4 506 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 ORAI3Q9BRQ5 295 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 LHX5Q9H2C1 402 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 TM9SF3Q9HD45 589 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 STRIP2Q9ULQ0 834 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIG1-209ENST00000596104 SNX11Q9Y5W9 270 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 LAMA5O15230 3695 aa10.43□□□□□ -0.74
LIG1-209ENST00000596104 TRABD2BA6NFA1 517 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 TNFSF14O43557 240 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 CALUO43852 315 aaPredicted RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 F13A1P00488 732 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 NR2F2P24468 414 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 GRK6P43250 576 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 GRIA4P48058 902 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 RAD23BP54727 409 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 CYP4F3Q08477 520 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 PDE4CQ08493 712 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 MPPE1Q53F39 396 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 LAYNQ6UX15 382 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 RSRC2Q7L4I2 434 aaKnown RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 KIAA0907Q7Z7F0 614 aaPredicted RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 ADIPOR2Q86V24 386 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ZC3H3Q8IXZ2 948 aaKnown RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 FAM186BQ8IYM0 893 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ZNF366Q8N895 744 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 WFIKKN2Q8TEU8 576 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 CYB5D2Q8WUJ1 264 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 SNX19Q92543 992 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 NDRG1Q92597 394 aaKnown RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 SEMA4DQ92854 862 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 IGSF8Q969P0 613 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 BIRC7Q96CA5 298 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 TMEM176AQ96HP8 235 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 FAXDC2Q96IV6 333 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 HEXIM2Q96MH2 286 aaKnown RBP10.42□□□□□ -0.74
LIG1-209ENST00000596104 ARID3AQ99856 593 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 TMEM8AQ9HCN3 771 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 STOML2Q9UJZ1 356 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 RCOR1Q9UKL0 485 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ANKRD6Q9Y2G4 727 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 ADAMTS20P59510 1910 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 CEP192Q8TEP8 1941 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 PLXNB3Q9ULL4 1909 aa10.42□□□□□ -0.74
LIG1-209ENST00000596104 A0A087WV48 116 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 FAM149AA5PLN7 773 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 H0Y8X5 98 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 TULP2O00295 520 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 KCNK3O14649 394 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 PCDHGA12O60330 932 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 TSPAN3O60637 253 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 SEMA4FO95754 770 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 ZBED1O96006 694 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 MYL1P05976 194 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 CD27P26842 260 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 CTSKP43235 329 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 CCT8P50990 548 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 TKTL1P51854 596 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 RPS14P62263 151 aaKnown RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 ARID5AQ03989 594 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 ZBTB16Q05516 673 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms