RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PQLC3Q8N755 202 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 RNF34Q969K3 372 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 HAPLN3Q96S86 360 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 PRKD2Q9BZL6 878 aa15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 DNMT3BQ9UBC3 853 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-211ENST00000595945 FAM72CH0Y354 149 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 CTIFO43310 598 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 XYLBO75191 536 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 MOSPD3O75425 235 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 TJP3O95049 919 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 FGF19O95750 216 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 PTPN2P17706 415 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 PFKLP17858 780 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 ZNF135P52742 658 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 TERF1P54274 439 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 ANKRD20A8PQ5CZ79 823 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 MANEALQ5VSG8 457 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 KAZNQ674X7 775 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 ELMSAN1Q6PJG2 1045 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 ADAT2Q7Z6V5 191 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 FAM72BQ86X60 149 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 MIB1Q86YT6 1006 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 LEMD2Q8NC56 503 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 PCDH19Q8TAB3 1148 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 CSPG4P5Q96PW8 444 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 KLF16Q9BXK1 252 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 CALN1Q9BXU9 219 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 RNF38Q9H0F5 515 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 ASAH2Q9NR71 780 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 HCFC1R1Q9NWW0 138 aa15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-211ENST00000595945 DOCK8Q8NF50 2099 aa15.27■□□□□ 0.03
SHKBP1-211ENST00000595945 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 GOLGA6L10A0A0M3HER8 536 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 H3BRJ5 948 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 CST8O60676 142 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 PHF2O75151 1096 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 PAGE1O75459 146 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 GOT1P17174 413 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 CCR2P41597 374 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 TUBB4BP68371 445 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 RBM10P98175 930 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 DPYSQ14117 519 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 TFDP2Q14188 446 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 PRSS36Q5K4E3 855 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 TMEM184AQ6ZMB5 413 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 RFX6Q8HWS3 928 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 ATP6V0D2Q8N8Y2 350 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 SHKBP1Q8TBC3 707 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 PLD4Q96BZ4 506 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 C1orf74Q96LT6 269 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 DCLK3Q9C098 648 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 ZNF576Q9H609 170 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 LRRC19Q9H756 370 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 XPO7Q9UIA9 1087 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 NEU3Q9UQ49 428 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 SNX10Q9Y5X0 201 aa15.26■□□□□ 0.03
SHKBP1-211ENST00000595945 LAMA3Q16787 3333 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 SOBPA7XYQ1 873 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 EEF2KO00418 725 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 APOEP02649 317 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 RHOP08100 348 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 MYL4P12829 197 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 HOXC13P31276 330 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 HTR7P34969 479 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 ARL4AP40617 200 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 KCNQ1P51787 676 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 MLLT6P55198 1093 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC7A9P82251 487 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 COG7P83436 770 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 CYP4F8P98187 520 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 MTA1Q13330 715 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 CCNG2Q16589 344 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 PIK3R6Q5UE93 754 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 TXNDC8Q6A555 127 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 RFX8Q6ZV50 586 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 ZNF683Q8IZ20 524 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 PLD5Q8N7P1 536 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 C1orf54Q8WWF1 131 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 PPP2R3CQ969Q6 453 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 AZIN2Q96A70 460 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 BTN2A3PQ96KV6 586 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-211ENST00000595945 DDX47Q9H0S4 455 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms