RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
IRF3-206ENST00000593818 SHC3Q92529 594 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 PNKPQ96T60 521 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 TRIM5Q9C035 493 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 TOR4AQ9NXH8 423 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 CDH9Q9ULB4 789 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 PCDHB4Q9Y5E5 795 aa13.06□□□□□ -0.32
IRF3-206ENST00000593818 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
IRF3-206ENST00000593818 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
IRF3-206ENST00000593818 GABRG2P18507 467 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 TNFRSF4P43489 277 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 PDE6CP51160 858 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
IRF3-206ENST00000593818 DDR2Q16832 855 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 C12orf40Q86WS4 652 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 CRYBG2Q8N1P7 616 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 MYLPFQ96A32 169 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 JAKMIP2Q96AA8 810 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 NT5C1AQ9BXI3 368 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 ZDHHC5Q9C0B5 715 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
IRF3-206ENST00000593818 CD248Q9HCU0 757 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 FAM49BQ9NUQ9 324 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 SUSD2Q9UGT4 822 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 CNTN6Q9UQ52 1028 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 PTPN13Q12923 2485 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
IRF3-206ENST00000593818 F8VZ95 297 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 LEFTY2O00292 366 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 FOXN3O00409 490 aaPredicted RBP13.04□□□□□ -0.32
IRF3-206ENST00000593818 OLFM2O95897 454 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 APODP05090 189 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 TPM3P06753 285 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ZNF883P0CG24 379 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 KRT5P13647 590 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 CCDC130P13994 396 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 HDCP19113 662 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 TRIM21P19474 475 aaKnown RBP13.04□□□□□ -0.32
IRF3-206ENST00000593818 USP8P40818 1118 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 GRIA2P42262 883 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 SLC6A11P48066 632 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ZNF75DP51815 510 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ZNF132P52740 706 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 JAM2P57087 298 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 GRIK2Q13002 908 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 DHCR24Q15392 516 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 CFAP221Q4G0U5 840 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 EMC10Q5UCC4 262 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 FAM171BQ6P995 826 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ADGRG2Q8IZP9 1017 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 C12orf29Q8N999 325 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 PCED1BQ96HM7 432 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ZNF419Q96HQ0 510 aaPredicted RBP13.04□□□□□ -0.32
IRF3-206ENST00000593818 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 FAM81BQ96LP2 452 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 STK33Q9BYT3 514 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 TTYH3Q9C0H2 523 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
IRF3-206ENST00000593818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.03□□□□□ -0.32
IRF3-206ENST00000593818 CLDN5O00501 218 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 CYP2F1P24903 491 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 SLC7A9P82251 487 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 PLEKHG6Q3KR16 790 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 TRMT11Q7Z4G4 463 aaKnown RBP13.03□□□□□ -0.32
IRF3-206ENST00000593818 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 FAM71AQ8IYT1 594 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 PGBD3Q8N328 593 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 BAP1Q92560 729 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 FUBP3Q96I24 572 aaKnown RBP eCLIP13.03□□□□□ -0.32
IRF3-206ENST00000593818 HEXIM2Q96MH2 286 aaKnown RBP13.03□□□□□ -0.32
IRF3-206ENST00000593818 ZSWIM1Q9BR11 485 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 ARHGEF4Q9NR80 690 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
IRF3-206ENST00000593818 TMEM131Q92545 1883 aa13.02□□□□□ -0.32
IRF3-206ENST00000593818 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
IRF3-206ENST00000593818 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
IRF3-206ENST00000593818 CYP26A1O43174 497 aa13.02□□□□□ -0.33
IRF3-206ENST00000593818 ZNF217O75362 1048 aa13.02□□□□□ -0.33
IRF3-206ENST00000593818 ADH1CP00326 375 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms