RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 FAXDC2Q96IV6 333 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 ZDHHC5Q9C0B5 715 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 PCDHB9Q9Y5E1 797 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 PLXNB3Q9ULL4 1909 aa17.11■□□□□ 0.33
LIG1-205ENST00000593425 TMEM131Q92545 1883 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 METTL12A8MUP2 240 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 ZZEF1O43149 2961 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 ZBED1O96006 694 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 IGLV3-19P01714 112 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 CAPNS1P04632 268 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 EPHX1P07099 455 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 HOXD9P28356 352 aaPredicted RBP17.1■□□□□ 0.33
LIG1-205ENST00000593425 OXTRP30559 389 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 RING1Q06587 406 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 PDE4CQ08493 712 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 TRIP4Q15650 581 aaPredicted RBP17.1■□□□□ 0.33
LIG1-205ENST00000593425 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 CBWD6Q4V339 395 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 CBWD3Q5JTY5 395 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 CBWD5Q5RIA9 395 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 PM20D1Q6GTS8 502 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 SERPINA13PQ6UXR4 307 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 FMNL3Q8IVF7 1028 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 ADAMTS14Q8WXS8 1223 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
LIG1-205ENST00000593425 TSPAN16Q9UKR8 245 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 SLCO1B1Q9Y6L6 691 aa17.1■□□□□ 0.33
LIG1-205ENST00000593425 PTPRBP23467 1997 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 BCAT2O15382 392 aaPredicted RBP17.09■□□□□ 0.33
LIG1-205ENST00000593425 TSPAN3O60637 253 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 CBFA2T3O75081 653 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 ACADMP11310 421 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 HLA-FP30511 346 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 FAM124AQ86V42 546 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 PROSER1Q86XN7 944 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 NUP58Q9BVL2 599 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 GAREM1Q9H706 876 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 PCOLCE2Q9UKZ9 415 aa17.09■□□□□ 0.33
LIG1-205ENST00000593425 FNDC3AQ9Y2H6 1198 aaKnown RBP17.09■□□□□ 0.33
LIG1-205ENST00000593425 FAM208BQ5VWN6 2430 aa17.08■□□□□ 0.33
LIG1-205ENST00000593425 XPO1O14980 1071 aaKnown RBP17.08■□□□□ 0.32
LIG1-205ENST00000593425 MSI1O43347 362 aaKnown RBP17.08■□□□□ 0.32
LIG1-205ENST00000593425 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
LIG1-205ENST00000593425 SGSHP51688 502 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 BCAT1P54687 386 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 SLC8A3P57103 927 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 SCAPQ12770 1279 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 MPPE1Q53F39 396 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 SLCO6A1Q86UG4 719 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 OR2T3Q8NH03 318 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 C1orf216Q8TAB5 229 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 EDEM1Q92611 657 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 C6orf106Q9H6K1 298 aaPredicted RBP17.08■□□□□ 0.32
LIG1-205ENST00000593425 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 OLA1Q9NTK5 396 aaKnown RBP17.08■□□□□ 0.32
LIG1-205ENST00000593425 LHX6Q9UPM6 363 aa17.08■□□□□ 0.32
LIG1-205ENST00000593425 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 YJEFN3A6XGL0 299 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 E7ENQ6 273 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 CETN3O15182 167 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 STX10O60499 249 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 ZNF202O95125 648 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 CER1O95813 267 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 MATKP42679 507 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 HARS2P49590 506 aaKnown RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 ARID5AQ03989 594 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 BST2Q10589 180 aaKnown RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 CUL2Q13617 745 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 E2F5Q15329 346 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 HLA-BQ31612 363 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 SGO2Q562F6 1265 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 DCAF17Q5H9S7 520 aaPredicted RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 TCERG1LQ5VWI1 586 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 BSPRYQ5W0U4 402 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 CHST9Q7L1S5 443 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 UBA3Q8TBC4 463 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 SETD7Q8WTS6 366 aaKnown RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 TMEM245Q9H330 911 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 TM7SF3Q9NS93 570 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
LIG1-205ENST00000593425 HBS1LQ9Y450 684 aaKnown RBP17.07■□□□□ 0.32
LIG1-205ENST00000593425 NUMA1Q14980 2115 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
LIG1-205ENST00000593425 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 TIMM44O43615 452 aa17.06■□□□□ 0.32
LIG1-205ENST00000593425 ZNF883P0CG24 379 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms