RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 APLP1P51693 650 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 GALNT1Q10472 559 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 TMPRSS6Q8IU80 811 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 ASIC4Q96FT7 647 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 C9orf72Q96LT7 481 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 KREMEN1Q96MU8 473 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 THTPAQ9BU02 230 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 C8orf4Q9NR00 106 aa12.61□□□□□ -0.39
SMARCA4-217ENST00000591595 CFL1P23528 166 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 FMO1Q01740 532 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 COX10Q12887 443 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PRR11Q96HE9 360 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 CCDC77Q9BR77 488 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 IER2Q9BTL4 223 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 KIFC3Q9BVG8 833 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 MOV10Q9HCE1 1003 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 FBXO28Q9NVF7 368 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PADI4Q9UM07 663 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 USTQ9Y2C2 406 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 DTNAQ9Y4J8 743 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 A0A0G2JND7 137 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PTGS2P35354 604 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 GNA13Q14344 377 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 OASLQ15646 514 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 KRT39Q6A163 491 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 NEK5Q6P3R8 708 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 DEPDC4Q8N2C3 294 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 TBC1D15Q8TC07 691 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PCP4L1A6NKN8 68 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 TAF4O00268 1085 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 TOM1O60784 492 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 P4HBP07237 508 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 CAPN1P07384 714 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 INHBBP09529 407 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 ITIH2P19823 946 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 MAP3K7CLP57077 242 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 GK3PQ14409 553 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 NPTX1Q15818 432 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PDK4Q16654 411 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 KCNH7Q9NS40 1196 aa12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-217ENST00000591595 PSMD12O00232 456 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 TTC4O95801 387 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 ADRB2P07550 413 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 PLS3P13797 630 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 NPR1P16066 1061 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 NKX2-5P52952 324 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 IRX4P78413 519 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 TMED2Q15363 201 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 TAS1R2Q8TE23 839 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 FAM84AQ96KN4 292 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC38A10Q9HBR0 1119 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 EBF1Q9UH73 591 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 SCO2O43819 266 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 PRDX6P30041 224 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 IGSF11Q5DX21 431 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 LDHDQ86WU2 507 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 GALNT13Q8IUC8 556 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 CPNE9Q8IYJ1 553 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 CLIP4Q8N3C7 705 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 SLC26A7Q8TE54 656 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 MOCS1Q9NZB8 636 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 WHRNQ9P202 907 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
SMARCA4-217ENST00000591595 A0A0B4J203 849 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 PEX1O43933 1283 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 RARRES1P49788 294 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 BMXP51813 675 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 PHC1P78364 1004 aa12.58□□□□□ -0.39
SMARCA4-217ENST00000591595 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms