RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SLC2A14Q8TDB8 520 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 PARD3BQ8TEW8 1205 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 TMEM174Q8WUU8 243 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 UCMAQ8WVF2 138 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ZDHHC5Q9C0B5 715 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 NAT10Q9H0A0 1025 aaKnown RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 NUP62CLQ9H1M0 184 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 CSNK1G1Q9HCP0 422 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 PNPLA8Q9NP80 782 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 TMEM74BQ9NUR3 256 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 EXOC1Q9NV70 894 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 MARK1Q9P0L2 795 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 CALCOCO1Q9P1Z2 691 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 MBD1Q9UIS9 605 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SCML2Q9UQR0 700 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF638Q14966 1978 aaKnown RBP9.93□□□□□ -0.82
BRCA1-226ENST00000591534 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
BRCA1-226ENST00000591534 SPAG17Q6Q759 2223 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 MAP1BP46821 2468 aaKnown RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 FAM237AA0A1B0GTK4 181 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 SERTM1A2A2V5 107 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 LRRIQ3A6PVS8 624 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 PDXKO00764 312 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CALUO43852 315 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 KLRC4O43908 158 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CACNG3O60359 315 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 C4BPAP04003 597 aaKnown RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 RALAP11233 206 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 TYRP14679 529 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 HNRNPLP14866 589 aaKnown RBP eCLIP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 PFKFB1P16118 471 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 GABRG2P18507 467 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CHKAP35790 457 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 DGKGP49619 791 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 NDST1P52848 882 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 MAP3K7CLP57077 242 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 SLC8A3P57103 927 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 SEMA3BQ13214 749 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CT47A1Q5JQC4 288 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 C16orf46Q6P387 395 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 PIP4P1Q86T03 277 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 FUKQ8N0W3 1084 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 TTC39CQ8N584 583 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 IPO4Q8TEX9 1081 aaKnown RBP9.92□□□□□ -0.82
BRCA1-226ENST00000591534 GABRG3Q99928 467 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 DCLK3Q9C098 648 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 GOLPH3LQ9H4A5 285 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CYP3A43Q9HB55 503 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 TMEM30AQ9NV96 361 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 DACH1Q9UI36 760 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 MSRB2Q9Y3D2 182 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 NME7Q9Y5B8 376 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 DENND4CQ5VZ89 1909 aa9.92□□□□□ -0.82
BRCA1-226ENST00000591534 IGHV1OR15-9A0A0B4J2B8 117 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
BRCA1-226ENST00000591534 CYBBP04839 570 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 SLFN14P0C7P3 912 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 KRT13P13646 458 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 MPSTP25325 297 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 OXTRP30559 389 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 PPP1R2P41236 205 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 PIK3CAP42336 1068 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 CASP4P49662 377 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 COG7P83436 770 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 MESP2Q0VG99 397 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 TEAD4Q15561 434 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 PLEKHG6Q3KR16 790 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 ZACNQ401N2 412 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 C10orf120Q5SQS8 335 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 C6orf118Q5T5N4 469 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 DNAJC14Q6Y2X3 702 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-226ENST00000591534 TPGS1Q6ZTW0 290 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 PAQR9Q6ZVX9 377 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 SFTPA1Q8IWL2 248 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 ARHGAP18Q8N392 663 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 MINDY1Q8N5J2 469 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 FRMD1Q8N878 549 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 ZCCHC14Q8WYQ9 949 aaKnown RBP9.91□□□□□ -0.82
BRCA1-226ENST00000591534 PAGE5Q96GU1 130 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 HSPA12BQ96MM6 686 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 HNRNPABQ99729 332 aaKnown RBP9.91□□□□□ -0.82
BRCA1-226ENST00000591534 SMOQ99835 787 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 NT5C1AQ9BXI3 368 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 CAPN10Q9HC96 672 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 ZDHHC4Q9NPG8 344 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 DMAC2Q9NW81 257 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 RMND1Q9NWS8 449 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 CYP8B1Q9UNU6 501 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 WASF3Q9UPY6 502 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 HPSEQ9Y251 543 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 NFE2L3Q9Y4A8 694 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 USP24Q9UPU5 2620 aa9.91□□□□□ -0.82
BRCA1-226ENST00000591534 ATXN2Q99700 1313 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 OBSL1O75147 1896 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms