RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 CUL2Q13617 745 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-230ENST00000591055 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 FMNL3Q8IVF7 1028 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 FAM217AQ8IXS0 508 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 RNF139Q8WU17 664 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 SORCS1Q8WY21 1168 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 DNASE2BQ8WZ79 361 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 PRCCQ92733 491 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-230ENST00000591055 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
CIRBP-230ENST00000591055 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 RALYQ9UKM9 306 aaKnown RBP16.46■□□□□ 0.23
CIRBP-230ENST00000591055 KLK13Q9UKR3 277 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 TSPAN16Q9UKR8 245 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 CKAP5Q14008 2032 aa16.46■□□□□ 0.23
CIRBP-230ENST00000591055 SPEGQ15772 3267 aa16.46■□□□□ 0.22
CIRBP-230ENST00000591055 A0A1B0GTW7 788 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 KCNJ18B7U540 433 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 SH3BP5O60239 455 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 TSPAN3O60637 253 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 GJB3O75712 270 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 EPHX1P07099 455 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ACADMP11310 421 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 PRKCHP24723 683 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 PRCPP42785 496 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ADIGQ0VDE8 80 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 BST2Q10589 180 aaKnown RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 GRIK2Q13002 908 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ZNF423Q2M1K9 1284 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 MPPE1Q53F39 396 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 TMEM215Q68D42 235 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 SERPINA13PQ6UXR4 307 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 BHLHA9Q7RTU4 235 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 CADM4Q8NFZ8 388 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ZCCHC14Q8WYQ9 949 aaKnown RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 ZDHHC5Q9C0B5 715 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 MIR1-1HGQ9H1L0 117 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 COQ4Q9Y3A0 265 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
CIRBP-230ENST00000591055 NFE2L3Q9Y4A8 694 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 PCDHB9Q9Y5E1 797 aa16.45■□□□□ 0.22
CIRBP-230ENST00000591055 HOXD9P28356 352 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-230ENST00000591055 COPAP53621 1224 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 FKBP3Q00688 224 aaKnown RBP16.44■□□□□ 0.22
CIRBP-230ENST00000591055 TRIP6Q15654 476 aaKnown RBP16.44■□□□□ 0.22
CIRBP-230ENST00000591055 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
CIRBP-230ENST00000591055 DCAF12L1Q5VU92 463 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 BSPRYQ5W0U4 402 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 CACUL1Q86Y37 369 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 SIX6OS1Q8N1H7 587 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 CHCHD4Q8N4Q1 142 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 UBA3Q8TBC4 463 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 EDEM1Q92611 657 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 CAMK1GQ96NX5 476 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 NUP58Q9BVL2 599 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 SFMBT1Q9UHJ3 866 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 WDFY3Q8IZQ1 3526 aa16.44■□□□□ 0.22
CIRBP-230ENST00000591055 YJEFN3A6XGL0 299 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 METTL12A8MUP2 240 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 E7ENQ6 273 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 IGLV3-19P01714 112 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 SETSIPP0DME0 302 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 VDRP11473 427 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 HLA-EP13747 358 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 ZNF445P59923 1031 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 LRMPQ12912 555 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 FNDC3BQ53EP0 1204 aaKnown RBP16.43■□□□□ 0.22
CIRBP-230ENST00000591055 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 ANKRD40Q6AI12 368 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 NAXDQ8IW45 347 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 ZC3H3Q8IXZ2 948 aaKnown RBP16.43■□□□□ 0.22
CIRBP-230ENST00000591055 OR2T3Q8NH03 318 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 WFIKKN2Q8TEU8 576 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
CIRBP-230ENST00000591055 ABCC13Q9NSE7 274 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-230ENST00000591055 KIAA1257Q9ULG3 409 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 CABIN1Q9Y6J0 2220 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
CIRBP-230ENST00000591055 O00370 1275 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-230ENST00000591055 SMC2O95347 1197 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 LATS1O95835 1130 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 LCP1P13796 627 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 TBXAS1P24557 533 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-230ENST00000591055 HLA-FP30511 346 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 ADGRF1Q5T601 910 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 RAB44Q7Z6P3 723 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-230ENST00000591055 FAM124AQ86V42 546 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-230ENST00000591055 CYB5D2Q8WUJ1 264 aa16.42■□□□□ 0.22
CIRBP-230ENST00000591055 KCTD13Q8WZ19 329 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms