RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 SULT1E1P49888 294 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 VCPP55072 806 aaKnown RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 PPP2R5DQ14738 602 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 SLC18A3Q16572 532 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 FAM133BQ5BKY9 247 aaKnown RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 TMEM31Q5JXX7 168 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 RNF43Q68DV7 783 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 NAIF1Q69YI7 327 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 NADSYN1Q6IA69 706 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 PLEKHA7Q6IQ23 1121 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 PHLDB2Q86SQ0 1253 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 TMEM25Q86YD3 366 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 UNC45BQ8IWX7 931 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 ETFBKMTQ8IXQ9 262 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 CCDC105Q8IYK2 499 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 FBXL6Q8N531 539 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 AZIN2Q96A70 460 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 TRIM11Q96F44 468 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 CFAP57Q96MR6 1250 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 TBCBQ99426 244 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 CHP1Q99653 195 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 LTB4R2Q9NPC1 389 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 ZNHIT6Q9NWK9 470 aaKnown RBP9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 STAP1Q9ULZ2 295 aa9.71□□□□□ -0.86
HMGN1P31-201ENST00000590085 CEP192Q8TEP8 1941 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SHROOM3Q8TF72 1996 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 USP34Q70CQ2 3546 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 KCNU1A8MYU2 1149 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 I6L893 689 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 M0QYT0 321 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 TRDMT1O14717 391 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CACNG3O60359 315 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ACSL4O60488 711 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ENDOD1O94919 500 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PENKP01210 267 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 APOEP02649 317 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MYBL1P10243 752 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SLC2A3P11169 496 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 KRT3P12035 628 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 AOC1P19801 751 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CCR1P32246 355 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 GBP1P32455 592 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CHKAP35790 457 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 EIF2DP41214 584 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SLC11A2P49281 568 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CXCR3P49682 368 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CLCN5P51795 746 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 RPL7AP62424 266 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MESP2Q0VG99 397 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 NR1H3Q13133 447 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 NME3Q13232 169 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 FZD5Q13467 585 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MAMLD1Q13495 774 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CCINQ13939 588 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CCDC14Q49A88 953 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 TMEM196Q5HYL7 178 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ADGRF1Q5T601 910 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 FYB2Q5VWT5 728 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ALKBH5Q6P6C2 394 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 C12orf40Q86WS4 652 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PHTF2Q8N3S3 785 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 FLCNQ8NFG4 579 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 RXFP2Q8WXD0 754 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 CENPIQ92674 756 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 ZNF653Q96CK0 615 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 BTN2A3PQ96KV6 586 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PRICKLE1Q96MT3 831 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MCEEQ96PE7 176 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SELENOOQ9BVL4 669 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 OSBPL6Q9BZF3 934 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MFSD1Q9H3U5 465 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 NHEJ1Q9H9Q4 299 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 PARVAQ9NVD7 372 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 DLGAP2Q9P1A6 1054 aa9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 XPO7Q9UIA9 1087 aaKnown RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P31-201ENST00000590085 SYNJ2BP-COX16A0A087WUM0 186 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 ANKRD36A6QL64 1941 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 NEDD8-MDP1E9PL57 170 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 MOCS2O96007 188 aaPredicted RBP9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 F9P00740 461 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 TYRP14679 529 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 PDGFRAP16234 1089 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 GPD1P21695 349 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 HOXD9P28356 352 aaPredicted RBP9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 SDC4P31431 198 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 SLC6A4P31645 630 aa9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 RDXP35241 583 aaKnown RBP9.69□□□□□ -0.86
HMGN1P31-201ENST00000590085 SGSHP51688 502 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms