RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PHACTR2O75167 634 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 CLSTN1O94985 981 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 ATICP31939 592 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 STAT6P42226 847 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 EFEMP1Q12805 493 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 KLHDC10Q6PID8 442 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 ADAT2Q7Z6V5 191 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 ERICH1Q86X53 443 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 DENND1CQ8IV53 801 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 FMNL3Q8IVF7 1028 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 EID2Q8N6I1 236 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 PDILTQ8N807 584 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 TMEM245Q9H330 911 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 SERGEFQ9UGK8 458 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 PCDHGA1Q9Y5H4 931 aa13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-210ENST00000589990 CAPN9O14815 690 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 FAM200BP0CF97 657 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 HLA-FP30511 346 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 HNF1BP35680 557 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 CEBPZQ03701 1054 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 BIRC3Q13489 604 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 ZNF667Q5HYK9 610 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 CRYBG2Q8N1P7 616 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 SAP25Q8TEE9 199 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 TSC1Q92574 1164 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 FGF11Q92914 225 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 NRSN2Q9GZP1 204 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 PRSS16Q9NQE7 514 aa13.39□□□□□ -0.27
PRKCSH-210ENST00000589990 FAM47DPA6NHR8 397 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 LRRIQ3A6PVS8 624 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 VILLO15195 856 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 C4BPAP04003 597 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 C7P10643 843 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 HOXD9P28356 352 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 KIF11P52732 1056 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 DLG4P78352 724 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 BNIP3Q12983 259 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 NCOA4Q13772 614 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 LY6DQ14210 128 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 EIF4HQ15056 248 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 BMT2Q1RMZ1 405 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 ADIPOR2Q86V24 386 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 ENGASEQ8NFI3 743 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 DDI1Q8WTU0 396 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 BAP1Q92560 729 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 TMEM176AQ96HP8 235 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 CAAP1Q9H8G2 361 aa13.38□□□□□ -0.27
PRKCSH-210ENST00000589990 ITGAVP06756 1048 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 CASP1P29466 404 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 CHKAP35790 457 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 ASPAP45381 313 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 SGSHP51688 502 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 BCAT1P54687 386 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 C21orf59P57076 290 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 RACK1P63244 317 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 RABEP1Q15276 862 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 TAF1BQ53T94 588 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 WFDC5Q8TCV5 224 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 HNRNPABQ99729 332 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 ARID3AQ99856 593 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 ACE2Q9BYF1 805 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 SMC3Q9UQE7 1217 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 PCDHB1Q9Y5F3 818 aa13.37□□□□□ -0.27
PRKCSH-210ENST00000589990 A0A1W2PPC4 97 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 EIF3DO15371 548 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ARHGAP6O43182 974 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ABCB4P21439 1286 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 TXLNAP40222 546 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ARID5AQ03989 594 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 CHST9Q7L1S5 443 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 CPXM2Q8N436 756 aa13.36□□□□□ -0.27
PRKCSH-210ENST00000589990 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms