RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CACNA1IQ9P0X4 2223 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 SLC12A8A0AV02 714 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 GOLGA6L3A6NEY3 463 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 LGALS16A8MUM7 142 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 LTFP02788 710 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 HMBSP08397 361 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PNMA6AP0CW24 399 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 ADH5P11766 374 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ZNF18P17022 549 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DRD1P21728 446 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 UBXN1Q04323 297 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 GAD2Q05329 585 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 CCINQ13939 588 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PPP2R5DQ14738 602 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 NCAPHQ15003 741 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ANO4Q32M45 955 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 TMEM196Q5HYL7 178 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 TBCELQ5QJ74 424 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 LY6G5CQ5SRR4 150 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DPY19L2P1Q6NXN4 242 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 HTR3DQ70Z44 454 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 BHLHA9Q7RTU4 235 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 LUZP1Q86V48 1076 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 SLC47A2Q86VL8 602 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PASD1Q8IV76 773 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ZNF295-AS1Q8N0V1 137 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 SYNPOQ8N3V7 929 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 RNF214Q8ND24 703 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 EDEM1Q92611 657 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 WBP2Q969T9 261 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 TRIM62Q9BVG3 475 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 STK33Q9BYT3 514 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 DCLK3Q9C098 648 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 PDCL3Q9H2J4 239 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 FAM207AQ9NSI2 230 aaPredicted RBP10.84□□□□□ -0.67
SDF2-208ENST00000589788 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 ZNF510Q9Y2H8 683 aa10.84□□□□□ -0.67
SDF2-208ENST00000589788 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 CACNA1HO95180 2353 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 LRRC10BA6NIK2 292 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 GOLGA6L19H0YKK7 550 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 STC2O76061 302 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 EGFP01133 1207 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 ATP1A3P13637 1013 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 PTGIRP43119 386 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 KLK7P49862 253 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 CCR3P51677 355 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 SNX16P57768 344 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
SDF2-208ENST00000589788 CSTF1Q05048 431 aaKnown RBP10.83□□□□□ -0.68
SDF2-208ENST00000589788 PDCLQ13371 301 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 SYCP1Q15431 976 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 FBXO43Q4G163 708 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 FILIP1LQ4L180 1135 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 NAIF1Q69YI7 327 aaPredicted RBP10.83□□□□□ -0.68
SDF2-208ENST00000589788 RHBDF2Q6PJF5 856 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 SPEM1Q8N4L4 309 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 NEK11Q8NG66 645 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 CLEC4CQ8WTT0 213 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 FAM149B1Q96BN6 582 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 SPAG5Q96R06 1193 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 NAA15Q9BXJ9 866 aaKnown RBP10.83□□□□□ -0.68
SDF2-208ENST00000589788 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 SPHK2Q9NRA0 654 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 FBXO4Q9UKT5 387 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 DAAM1Q9Y4D1 1078 aa10.83□□□□□ -0.68
SDF2-208ENST00000589788 DNMT3AQ9Y6K1 912 aaPredicted RBP10.83□□□□□ -0.68
SDF2-208ENST00000589788 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 E5RJQ4 531 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 F8VZ95 297 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 CAPN9O14815 690 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 GREM1O60565 184 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 ATG13O75143 517 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 SP9P0CG40 484 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 NCAM1P13591 858 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 CYP11B1P15538 503 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 CORO1AP31146 461 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 OPRD1P41143 372 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 CXCL12P48061 93 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 RPL34P49207 117 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 HARS2P49590 506 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 TPM4P67936 248 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 TLR1Q15399 786 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 PREPLQ4J6C6 727 aaPredicted RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 ZC3H14Q6PJT7 736 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 Q6ZS52 159 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 TPGS1Q6ZTW0 290 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 TMEM25Q86YD3 366 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 DENND1CQ8IV53 801 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 IPO4Q8TEX9 1081 aaKnown RBP10.82□□□□□ -0.68
SDF2-208ENST00000589788 HPS1Q92902 700 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 PPP1R13BQ96KQ4 1090 aa10.82□□□□□ -0.68
SDF2-208ENST00000589788 PNKPQ96T60 521 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms