RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 VAMP7P51809 220 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 COG7P83436 770 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 PKP1Q13835 747 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 TRIP4Q15650 581 aaPredicted RBP14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 NFIL3Q16649 462 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 KIF19Q2TAC6 998 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 LAYNQ6UX15 382 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 ADIPOR2Q86V24 386 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 PIGZQ86VD9 579 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 SLC4A11Q8NBS3 891 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 KNL1Q8NG31 2342 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 OR2T3Q8NH03 318 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 SEMA4DQ92854 862 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 HELZ2Q9BYK8 2649 aaKnown RBP14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 OSGEPQ9NPF4 335 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 MARCH2Q9P0N8 246 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 SNX11Q9Y5W9 270 aa14.45□□□□□ -0.1
CLPTM1-208ENST00000588274 COL5A1P20908 1838 aaPredicted RBP14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 CABIN1Q9Y6J0 2220 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 TULP2O00295 520 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 EPHX1P07099 455 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 RALAP11233 206 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 SGSHP51688 502 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 ENPEPQ07075 957 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 ZCWPW2Q504Y3 356 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 CEP135Q66GS9 1140 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 PM20D1Q6GTS8 502 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 IL27RAQ6UWB1 636 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 TADA2BQ86TJ2 420 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 ZNF366Q8N895 744 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 WFDC5Q8TCV5 224 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 SETD7Q8WTS6 366 aaKnown RBP14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 CRELD1Q96HD1 420 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 CDK5RAP1Q96SZ6 601 aaKnown RBP14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 NUP58Q9BVL2 599 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 SLC2A11Q9BYW1 496 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 DCLK3Q9C098 648 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 CIPCQ9C0C6 399 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 TM9SF3Q9HD45 589 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 EXOC1Q9NV70 894 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 HPSEQ9Y251 543 aa14.44□□□□□ -0.1
CLPTM1-208ENST00000588274 TP53BP1Q12888 1972 aaPredicted RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 SYNCRIPO60506 623 aaKnown RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 F13A1P00488 732 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 GRIA4P48058 902 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 AFF3P51826 1226 aaKnown RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 RAD23BP54727 409 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 YWHAGP61981 247 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 SMAD1Q15797 465 aaKnown RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 ZNF394Q53GI3 561 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 ARHGAP17Q68EM7 881 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 FAM124AQ86V42 546 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 UCMAQ8WVF2 138 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 NDRG1Q92597 394 aaKnown RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 PLD4Q96BZ4 506 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 BIRC7Q96CA5 298 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 MYO19Q96H55 970 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 LMLNQ96KR4 655 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 UBXN6Q9BZV1 441 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 FAM13BQ9NYF5 915 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 CFAP46Q8IYW2 2715 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 PLXNA2O75051 1894 aa14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 ASH1LQ9NR48 2969 aaKnown RBP14.43□□□□□ -0.1
CLPTM1-208ENST00000588274 A0A087WV48 116 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 SLC12A8A0AV02 714 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 PCDHGA12O60330 932 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 TSPAN3O60637 253 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 IGHV4-34P06331 123 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 ZSCAN22P10073 491 aaPredicted RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 PFKFB1P16118 471 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 NR2F2P24468 414 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 CTSKP43235 329 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 ME1P48163 572 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 RPS14P62263 151 aaKnown RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 PDE4CQ08493 712 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 FOXD4L6Q3SYB3 417 aaPredicted RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 FOXD4L3Q6VB84 417 aaPredicted RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 INTS8Q75QN2 995 aaKnown RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 CYB5D2Q8WUJ1 264 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 HNRNPLLQ8WVV9 542 aaKnown RBP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 CDC6Q99741 560 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 LHX5Q9H2C1 402 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 TMEM8AQ9HCN3 771 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 PRSS16Q9NQE7 514 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 CISHQ9NSE2 258 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 RCOR1Q9UKL0 485 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 FRMD4BQ9Y2L6 1034 aa14.42□□□□□ -0.1
CLPTM1-208ENST00000588274 FAM149AA5PLN7 773 aa14.41□□□□□ -0.1
CLPTM1-208ENST00000588274 H0Y8X5 98 aa14.41□□□□□ -0.1
CLPTM1-208ENST00000588274 KCNK3O14649 394 aa14.41□□□□□ -0.1
CLPTM1-208ENST00000588274 GABBR2O75899 941 aa14.41□□□□□ -0.1
CLPTM1-208ENST00000588274 RHOBTB3O94955 611 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms