RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SLC5A9Q2M3M2 681 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 ARL13BQ3SXY8 428 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 STXBP5Q5T5C0 1151 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 KLHDC10Q6PID8 442 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 GRASPQ7Z6J2 395 aaPredicted RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CTAGE6Q86UF2 777 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 RFX6Q8HWS3 928 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CTAGE4Q8IX94 777 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 NOA1Q8NC60 698 aaKnown RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 MNS1Q8NEH6 495 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 FAF2Q96CS3 445 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 TCEAL4Q96EI5 215 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CYP2S1Q96SQ9 504 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 ZNF670Q9BS34 389 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 PRKD2Q9BZL6 878 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 NACA2Q9H009 215 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 ATXN3LQ9H3M9 355 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 RBM12Q9NTZ6 932 aaKnown RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.72□□□□□ -0.53
VMP1-207ENST00000588131 DPP7Q9UHL4 492 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 HBS1LQ9Y450 684 aaKnown RBP11.72□□□□□ -0.53
VMP1-207ENST00000588131 NOTCH4Q99466 2003 aa11.72□□□□□ -0.53
VMP1-207ENST00000588131 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 CREB3O43889 395 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 XYLBO75191 536 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 PAPLNO95428 1278 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 GOT1P17174 413 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 CETN2P41208 172 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 DYNLT1P63172 113 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 GRIN2CQ14957 1233 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 TEAD2Q15562 447 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 PRSS36Q5K4E3 855 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 ARTNQ5T4W7 220 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 TMC5Q6UXY8 1006 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 MAP7D3Q8IWC1 876 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 PQLC3Q8N755 202 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 ARL14EPQ8N8R7 260 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 PRELID2Q8N945 189 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 MRPS31Q92665 395 aaKnown RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 WBP2Q969T9 261 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 RNF157Q96PX1 679 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 NAP1L3Q99457 506 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 KLF16Q9BXK1 252 aaPredicted RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 SFXN1Q9H9B4 322 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 GKN1Q9NS71 199 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 SMPD4Q9NXE4 827 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 CWC15Q9P013 229 aaKnown RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 R3HDM2Q9Y2K5 976 aaKnown RBP11.71□□□□□ -0.53
VMP1-207ENST00000588131 HS3ST4Q9Y661 456 aa11.71□□□□□ -0.53
VMP1-207ENST00000588131 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.54
VMP1-207ENST00000588131 MYO7AQ13402 2215 aa11.71□□□□□ -0.54
VMP1-207ENST00000588131 H3BRJ5 948 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 CST8O60676 142 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 STC2O76061 302 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 APOEP02649 317 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 IRF1P10914 325 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 SLC2A3P11169 496 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 HDCP19113 662 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 AMPD1P23109 780 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 CLCN6P51797 869 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 ITIH3Q06033 890 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 RING1Q06587 406 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 CLUL1Q15846 466 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 RARS2Q5T160 578 aaKnown RBP11.7□□□□□ -0.54
VMP1-207ENST00000588131 GPR158Q5T848 1215 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 PIK3R6Q5UE93 754 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 TMEM184AQ6ZMB5 413 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 BBS12Q6ZW61 710 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 C14orf80Q86SX3 495 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 VSIG1Q86XK7 387 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 ADAMTS19Q8TE59 1207 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 C1orf54Q8WWF1 131 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 ATG4AQ8WYN0 398 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
VMP1-207ENST00000588131 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 HAUS1Q96CS2 278 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 HAPLN3Q96S86 360 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 FAM118BQ9BPY3 351 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 APOL5Q9BWW9 433 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 SLC46A2Q9BY10 475 aa11.7□□□□□ -0.54
VMP1-207ENST00000588131 SIK2Q9H0K1 926 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms