RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 DCLK3Q9C098 648 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 TKTL2Q9H0I9 626 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 EBF3Q9H4W6 596 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 WDCPQ9H6R7 721 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 LUC7LQ9NQ29 371 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 HPS4Q9NQG7 708 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 DUS2Q9NX74 493 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 IP6K2Q9UHH9 426 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 LSM7Q9UK45 103 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 MYOFQ9NZM1 2061 aa11.12□□□□□ -0.63
SMARCA4-213ENST00000587988 A0A0A6YYK5 440 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 ARNTLO00327 626 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TRDMT1O14717 391 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 CHADO15335 359 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 BUB1O43683 1085 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 NRDCO43847 1150 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 ACSL4O60488 711 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 LRCH4O75427 683 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TCF4P15884 667 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 MIPP30301 263 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC6A4P31645 630 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 GGCXP38435 758 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 IFNAR2P48551 515 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TDGQ13569 410 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 PIGHQ14442 188 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 MESDQ14696 234 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 ARHGAP29Q52LW3 1261 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 FAM133BQ5BKY9 247 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 IER5LQ5T953 404 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 PIK3R6Q5UE93 754 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 ATP6V0D2Q8N8Y2 350 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 MYEOVQ96EZ4 313 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 UHRF1Q96T88 793 aaPredicted RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 BRD9Q9H8M2 597 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 THG1LQ9NWX6 298 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 GTSE1Q9NYZ3 720 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TBC1D14Q9P2M4 693 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 STOML2Q9UJZ1 356 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 ZNF510Q9Y2H8 683 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 SNX10Q9Y5X0 201 aa11.11□□□□□ -0.63
SMARCA4-213ENST00000587988 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 BTNL10A8MVZ5 291 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PAGE1O75459 146 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 RNF8O76064 485 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PROSCO94903 275 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 APOEP02649 317 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC2A3P11169 496 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 IL1R2P27930 398 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 ADRA1BP35368 520 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 ARHGAP25P42331 645 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 SGSHP51688 502 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 HADHBP55084 474 aaKnown RBP11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 ACAP1Q15027 740 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 MS4A13Q5J8X5 152 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 RAP1GAP2Q684P5 730 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 TXNRD3NBQ6F5E7 133 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 RFWD3Q6PCD5 774 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 RHBDF2Q6PJF5 856 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 TPGS1Q6ZTW0 290 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 CYP4V2Q6ZWL3 525 aaPredicted RBP11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 C14orf80Q86SX3 495 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 TMEM25Q86YD3 366 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 FAM217AQ8IXS0 508 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 KIAA1958Q8N8K9 716 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 NIPA2Q8N8Q9 360 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 BTN2A3PQ96KV6 586 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PRMT1Q99873 361 aaKnown RBP11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 GOLPH3Q9H4A6 298 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 DUSP12Q9UNI6 340 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 SORCS3Q9UPU3 1222 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PPP2R2CQ9Y2T4 447 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 HS3ST4Q9Y661 456 aa11.1□□□□□ -0.63
SMARCA4-213ENST00000587988 COL4A2P08572 1712 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 MACROD2A1Z1Q3 448 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 GFRA2O00451 464 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 SLC9A3R1O14745 358 aaPredicted RBP11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 TSPAN3O60637 253 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 MOCS3O95396 460 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 LATS1O95835 1130 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 CYP17A1P05093 508 aa11.09□□□□□ -0.63
SMARCA4-213ENST00000587988 CCDC175P0C221 793 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms