RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KRT37O76014 449 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 PRKCHP24723 683 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 MAOBP27338 520 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 SGSHP51688 502 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 ZNF132P52740 706 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 ZNF252P-AS1Q0IIN9 211 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 CETN1Q12798 172 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 ENPP2Q13822 863 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 DUOXA1Q1HG43 343 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 MPPE1Q53F39 396 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 CACUL1Q86Y37 369 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 TRIM59Q8IWR1 403 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 OR2I1PQ8NGU4 316 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 TMA16Q96EY4 203 aaKnown RBP14.96□□□□□ -0.01
VMP1-206ENST00000587945 TOE1Q96GM8 510 aaKnown RBP14.96□□□□□ -0.01
VMP1-206ENST00000587945 SRRTQ9BXP5 876 aaKnown RBP14.96□□□□□ -0.01
VMP1-206ENST00000587945 SLC2A11Q9BYW1 496 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 MIS12Q9H081 205 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 PRDM16Q9HAZ2 1276 aa14.96□□□□□ -0.01
VMP1-206ENST00000587945 GON4LQ3T8J9 2241 aa14.96□□□□□ -0.02
VMP1-206ENST00000587945 MYO18AQ92614 2054 aaKnown RBP14.96□□□□□ -0.02
VMP1-206ENST00000587945 EPG5Q9HCE0 2579 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 THADAQ6YHU6 1953 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 GOLGA6L7A0A1B0GV03 622 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 BICDL2A1A5D9 508 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 KCNJ18B7U540 433 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 SERPINF2P08697 491 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 HLA-EP13747 358 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 CD6P30203 668 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 HLA-FP30511 346 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 HOXD12P35452 270 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 DPP6P42658 865 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 SHC2P98077 582 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 GFPT1Q06210 699 aaPredicted RBP14.95□□□□□ -0.02
VMP1-206ENST00000587945 PAK1Q13153 545 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 EIF4HQ15056 248 aaKnown RBP14.95□□□□□ -0.02
VMP1-206ENST00000587945 ADGRF1Q5T601 910 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 MSANTD2Q6P1R3 559 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 RFWD3Q6PCD5 774 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 TMPRSS6Q8IU80 811 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 RGL4Q8IZJ4 473 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 SCML4Q8N228 414 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 CEP76Q8TAP6 659 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 CYB5D2Q8WUJ1 264 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 ZNF419Q96HQ0 510 aaPredicted RBP14.95□□□□□ -0.02
VMP1-206ENST00000587945 INTS2Q9H0H0 1204 aaKnown RBP14.95□□□□□ -0.02
VMP1-206ENST00000587945 CAPN10Q9HC96 672 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 STOML2Q9UJZ1 356 aa14.95□□□□□ -0.02
VMP1-206ENST00000587945 NPC1O15118 1278 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 TOP3BO95985 862 aaKnown RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 AFPP02771 609 aaKnown RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 LTFP02788 710 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 EPHX1P07099 455 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 NCAM1P13591 858 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 KRT5P13647 590 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 CEACAM1P13688 526 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 SPINK2P20155 84 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 CSRP1P21291 193 aaKnown RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 COPAP53621 1224 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 GCNT1Q02742 428 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ARID5AQ03989 594 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 FOXC1Q12948 553 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 STILQ15468 1287 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ST3GAL2Q16842 350 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 FOXR2Q6PJQ5 311 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 SERPINA13PQ6UXR4 307 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 CHST9Q7L1S5 443 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ZNF366Q8N895 744 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 WFDC5Q8TCV5 224 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 IRGQQ8WZA9 623 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 SIPA1Q96FS4 1042 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 HSFY1Q96LI6 401 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 GPR174Q9BXC1 333 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ITM2CQ9NQX7 267 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 ABCB8Q9NUT2 735 aa14.94□□□□□ -0.02
VMP1-206ENST00000587945 WSB2Q9NYS7 404 aaPredicted RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 USP36Q9P275 1121 aaKnown RBP14.94□□□□□ -0.02
VMP1-206ENST00000587945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
VMP1-206ENST00000587945 TIMM44O43615 452 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 LATS1O95835 1130 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 GNA14O95837 355 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 IGLV3-27P01718 113 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 FYNP06241 537 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 SLC6A4P31645 630 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 TPMTP51580 245 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 TBX4P57082 545 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 FAM133BQ5BKY9 247 aaKnown RBP14.93□□□□□ -0.02
VMP1-206ENST00000587945 DENND1BQ6P3S1 775 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 METTL3Q86U44 580 aaKnown RBP14.93□□□□□ -0.02
VMP1-206ENST00000587945 ADIPOR2Q86V24 386 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 SCUBE3Q8IX30 993 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 MINDY1Q8N5J2 469 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 PRCCQ92733 491 aaPredicted RBP14.93□□□□□ -0.02
VMP1-206ENST00000587945 MYEOVQ96EZ4 313 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 UBE2TQ9NPD8 197 aaPredicted RBP14.93□□□□□ -0.02
VMP1-206ENST00000587945 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 ST7Q9NRC1 585 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 STIM2Q9P246 746 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms