RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 NEUROG3Q9Y4Z2 214 aa6.72□□□□□ -1.33
SDF2-205ENST00000587629 USP3Q9Y6I4 520 aa6.72□□□□□ -1.33
SDF2-205ENST00000587629 IGF2RP11717 2491 aa6.72□□□□□ -1.33
SDF2-205ENST00000587629 MYH10P35580 1976 aa6.71□□□□□ -1.33
SDF2-205ENST00000587629 A0A1B0GTW7 788 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 TMEM8BA6NDV4 472 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 PIK3R2O00459 728 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 KCNK3O14649 394 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 MAPK13O15264 365 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 MSI1O43347 362 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 ZBED1O96006 694 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 MYL1P05976 194 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 FTH1P19P0C7X4 201 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 ACADMP11310 421 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 CD19P15391 556 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 CSNK1EP49674 416 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 MXI1P50539 228 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 SLC8A3P57103 927 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 KRT85P78386 507 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 RING1Q06587 406 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 PDE4CQ08493 712 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 LRMPQ12912 555 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 DCAF17Q5H9S7 520 aaPredicted RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 TCERG1LQ5VWI1 586 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 TMEM215Q68D42 235 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 SERPINA13PQ6UXR4 307 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 KRBA2Q6ZNG9 492 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 ANKS1BQ7Z6G8 1248 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 FMNL3Q8IVF7 1028 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 ARHGAP18Q8N392 663 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 GUF1Q8N442 669 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 ANKRD52Q8NB46 1076 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 FBXL13Q8NEE6 735 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 UCMAQ8WVF2 138 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 KCTD12Q96CX2 325 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 CDK5RAP1Q96SZ6 601 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 ULBP1Q9BZM6 244 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 GAREM1Q9H706 876 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 LRRC4Q9HBW1 653 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 GDPD2Q9HCC8 539 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 RAB20Q9NX57 234 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 WSB2Q9NYS7 404 aaPredicted RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 SFMBT1Q9UHJ3 866 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 EIF2B4Q9UI10 523 aaKnown RBP6.71□□□□□ -1.34
SDF2-205ENST00000587629 SLCO1B1Q9Y6L6 691 aa6.71□□□□□ -1.34
SDF2-205ENST00000587629 CEP192Q8TEP8 1941 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CACNA1EQ15878 2313 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 PCDH15Q96QU1 1955 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 GOLGA6L7A0A1B0GV03 622 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 A0A1B0GVT2 93 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 YJEFN3A6XGL0 299 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 E7ENQ6 273 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 H0Y626 953 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 TAF4O00268 1085 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CETN3O15182 167 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 BCAT2O15382 392 aaPredicted RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 GJB3O75712 270 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ZNF202O95125 648 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 TRIM16O95361 564 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CALCAP01258 141 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 EPB41P11171 864 aaKnown RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 LCP1P13796 627 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 HOXD9P28356 352 aaPredicted RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 OXTRP30559 389 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 GTF2H1P32780 548 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 HARS2P49590 506 aaKnown RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 RGS7P49802 495 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 SGSHP51688 502 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 COPAP53621 1224 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 BNC1Q01954 994 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ADIGQ0VDE8 80 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 SLC14A1Q13336 389 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 PNOCQ13519 176 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ENPP2Q13822 863 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 NFIL3Q16649 462 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ZNF423Q2M1K9 1284 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 HLA-BQ31612 363 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CBWD6Q4V339 395 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ZCWPW2Q504Y3 356 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 SGO2Q562F6 1265 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CCDC157Q569K6 752 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 RAB41Q5JT25 222 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CBWD3Q5JTY5 395 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CBWD5Q5RIA9 395 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 BSPRYQ5W0U4 402 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ARHGAP17Q68EM7 881 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 RFWD3Q6PCD5 774 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 C19orf48Q6RUI8 117 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 LAYNQ6UX15 382 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 RAB44Q7Z6P3 723 aaPredicted RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 SLCO6A1Q86UG4 719 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 MARCH9Q86YJ5 346 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 SIX6OS1Q8N1H7 587 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms