RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 FBXO16Q8IX29 292 aaPredicted RBP13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 NSMCE2Q96MF7 247 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 NFKBIZQ9BYH8 718 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 REXO4Q9GZR2 422 aaKnown RBP13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 SEMA4AQ9H3S1 761 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 TBC1D13Q9NVG8 400 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 KLHL28Q9NXS3 571 aa13.58□□□□□ -0.23
RAB11FIP4-210ENST00000585058 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 BCL10O95999 233 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GLI1P08151 1106 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 NEDD8Q15843 81 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 IL25Q9H293 177 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 L2HGDHQ9H9P8 463 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GTF2E2P29084 291 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MAGEA10P43363 369 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GCLCP48506 637 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TROAPQ12815 778 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PTPAQ15257 358 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TTI2Q6NXR4 508 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FNDC5Q8NAU1 212 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SERAC1Q96JX3 654 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GANQ9H2C0 597 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DMGDHQ9UI17 866 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 WDR27A2RRH5 827 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CD151P48509 253 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PTPN11Q06124 597 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TGM3Q08188 693 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CBWD3Q5JTY5 395 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CBWD5Q5RIA9 395 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZNF57Q68EA5 555 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CASP12Q6UXS9 341 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 EID3Q8N140 333 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PRCCQ92733 491 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DCUN1D5Q9BTE7 237 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CYLDQ9NQC7 956 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CASTOR2A6NHX0 329 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 NTSR2O95665 410 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KRT6AP02538 564 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KRT6BP04259 564 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 THP07101 528 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PIK3R1P27986 724 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KRT6CP48668 564 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 BST2Q10589 180 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GRIK3Q13003 919 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 COMMD2Q86X83 199 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DHFR2Q86XF0 187 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 WDR49Q8IV35 697 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 EDEM1Q92611 657 aa13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TSPAN3O60637 253 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TNNI3P19429 210 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TRMT11Q7Z4G4 463 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TFAP2DQ7Z6R9 452 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RNF148Q8N7C7 305 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 IFRD1O00458 451 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 HS6ST1O60243 411 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CSDE1O75534 798 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 AKAP3O75969 853 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GSTA3Q16772 222 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 HERC6Q8IVU3 1022 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CENPXA8MT69 81 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ELK3P41970 407 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SERPINH1P50454 418 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FCGRTP55899 365 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DNAJC14Q6Y2X3 702 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MPP4Q96JB8 637 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TMEM237Q96Q45 408 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 A0A0A6YYK5 440 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 H3BQF6 201 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RIPK2O43353 540 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TBC1D12O60347 775 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PCDH8O95206 1070 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 LTFP02788 710 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 URODP06132 367 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CXCL8P10145 99 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MSH3P20585 1137 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 LHX1P48742 406 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FASTKQ14296 549 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 C16orf72Q14CZ0 275 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ERMARDQ5T6L9 678 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZCCHC7Q8N3Z6 543 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RMND5BQ96G75 393 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MID1IP1Q9NPA3 183 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms