RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, human

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-211	ENST00000584992	MECR	Q9BV79	373 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	ELOVL1	Q9BW60	279 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	PABPC3	Q9H361	631 aa	Known RBP	4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	CDCP1	Q9H5V8	836 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	ELAC1	Q9H777	363 aa	Known RBP	4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	ARL8B	Q9NVJ2	186 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	GAR1	Q9NY12	217 aa	Known RBP	4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	RAB21	Q9UL25	225 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	NFU1	Q9UMS0	254 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	CNTN6	Q9UQ52	1028 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	RIPOR2	Q9Y4F9	1068 aa		4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.55	□□□□□ -1.68
RIOK3-211	ENST00000584992	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A18P	A6NE21	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A16P	A6NEW6	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	HMX3	A6NHT5	357 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A9P	A6NNJ1	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A5P	A8MXJ8	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	TTC34	A8MYJ7	566 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	NKX2-8	O15522	239 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	RBMXL2	O75526	392 aa	Known RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	RNF8	O76064	485 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A15P	P0C7V4	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM90A14P	P0C7W9	464 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	HAL	P42357	657 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	AGTR2	P50052	363 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	FOXO1	Q12778	655 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	GAB1	Q13480	694 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	PRKG1	Q13976	671 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	PFKFB3	Q16875	520 aa	Predicted RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	NFRKB	Q6P4R8	1299 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	ZNF66	Q6ZN08	573 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	RRAGA	Q7L523	313 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	RAB11FIP2	Q7L804	512 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	ANKRD42	Q8N9B4	389 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	SPATA5	Q8NB90	893 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	TRAPPC12	Q8WVT3	735 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	GLMP	Q8WWB7	406 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	DDB2	Q92466	427 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	RSC1A1	Q92681	617 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	C3orf49	Q96BT1	292 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	KRTAP4-2	Q9BYR5	136 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	MYLK2	Q9H1R3	596 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	VPS16	Q9H269	839 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	AGO4	Q9HCK5	861 aa	Known RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	KCNK9	Q9NPC2	374 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	PRDM8	Q9NQV8	689 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	ASNSD1	Q9NWL6	643 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	TRPC5	Q9UL62	973 aa	Predicted RBP	4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	DAPP1	Q9UN19	280 aa		4.54	□□□□□ -1.68
RIOK3-211	ENST00000584992	SPATA31A1	Q5TZJ5	1347 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	LOC105369274	A0A096LPK9	316 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	LOC102723532	A0A0G2JNH3	316 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	EFCAB8	A8MWE9	144 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	IPO5	O00410	1097 aa	Known RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	PRY	O14603	147 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	PIP5K1C	O60331	668 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	VEGFA	P15692	232 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	NDUFS1	P28331	727 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	CD38	P28907	300 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	MPG	P29372	298 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	SLC8A1	P32418	973 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	FAM3B	P58499	235 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	ZNF268	Q14587	947 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	POSTN	Q15063	836 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	TRIM60	Q495X7	471 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	TANGO2	Q6ICL3	276 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	WDR93	Q6P2C0	686 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	OR4N4	Q8N0Y3	316 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	NKAP	Q8N5F7	415 aa	Known RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	ZNF764	Q96H86	408 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	TRAPPC9	Q96Q05	1148 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	SH2D3A	Q9BRG2	576 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	HERPUD2	Q9BSE4	406 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	TMEM120A	Q9BXJ8	343 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	RNF26	Q9BY78	433 aa	Predicted RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	NUAK2	Q9H093	628 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	SEPSECS	Q9HD40	501 aa	Known RBP	4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	SEMA5B	Q9P283	1151 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	MAFF	Q9ULX9	164 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	SLC12A4	Q9UP95	1085 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	ZBTB1	Q9Y2K1	713 aa		4.53	□□□□□ -1.68
RIOK3-211	ENST00000584992	TBC1D3D	A0A087WVF3	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3I	A0A087WXS9	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3E	A0A087X179	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3K	A0A087X1G2	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3B	A6NDS4	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	WIPF3	A6NGB9	483 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	SLC38A8	A6NNN8	435 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	C16orf96	A6NNT2	1141 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3L	B9A6J9	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	LARGE1	O95461	756 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TBC1D3H	P0C7X1	549 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	GRK5	P34947	590 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	STAT6	P42226	847 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	TAS2R50	P59544	299 aa		4.52	□□□□□ -1.69
RIOK3-211	ENST00000584992	RPL15	P61313	204 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms