RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 HMGXB4Q9UGU5 601 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
TOP3A-215ENST00000583328 PCDHGA1Q9Y5H4 931 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 RAI2Q9Y5P3 530 aa12.9□□□□□ -0.34
TOP3A-215ENST00000583328 UBE4BO95155 1302 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 ENC1O14682 589 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 CAPN9O14815 690 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 VNN1O95497 513 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 LDOC1O95751 146 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 CD27P26842 260 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 EIF2S3P41091 472 aaKnown RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 CTSKP43235 329 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 KIF11P52732 1056 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 BCAT1P54687 386 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 C21orf59P57076 290 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 EFEMP1Q12805 493 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 CAMK2GQ13555 558 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 FNDC3BQ53EP0 1204 aaKnown RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 KCNT1Q5JUK3 1230 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 ATL3Q6DD88 541 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 ZNF276Q8N554 614 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 RBBP8NLQ8NC74 664 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 USP28Q96RU2 1077 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 PNPLA8Q9NP80 782 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 PLA2G4CQ9UP65 541 aa12.89□□□□□ -0.35
TOP3A-215ENST00000583328 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-215ENST00000583328 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 SLC12A8A0AV02 714 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 TSPAN3O60637 253 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 DNTTP04053 509 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CDK4P11802 303 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CLDN6P56747 220 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CYB5D2Q8WUJ1 264 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 BAP1Q92560 729 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 DHX58Q96C10 678 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CNDP2Q96KP4 475 aaKnown RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CUEDC2Q9H467 287 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 SGK2Q9HBY8 427 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 CLIC5Q9NZA1 410 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 TFIP11Q9UBB9 837 aaKnown RBP12.88□□□□□ -0.35
TOP3A-215ENST00000583328 STRIP2Q9ULQ0 834 aa12.88□□□□□ -0.35
TOP3A-215ENST00000583328 PAPSS1O43252 624 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 RFPL3O75679 317 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 YEATS4O95619 227 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 ITGAVP06756 1048 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 C1SP09871 688 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 ABCB4P21439 1286 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 STK38Q15208 465 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 TTC31Q49AM3 519 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 RSRC2Q7L4I2 434 aaKnown RBP12.87□□□□□ -0.35
TOP3A-215ENST00000583328 GPR155Q7Z3F1 870 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 GANCQ8TET4 914 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 WFIKKN2Q8TEU8 576 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 TAF4BQ92750 862 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 TWNKQ96RR1 684 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 FBRSQ9HAH7 460 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 SLC39A2Q9NP94 309 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 MARCH2Q9P0N8 246 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 CFAP45Q9UL16 551 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
TOP3A-215ENST00000583328 FAM47DPA6NHR8 397 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 CBX4O00257 560 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 VILLO15195 856 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 CLDN10P78369 228 aa12.86□□□□□ -0.35
TOP3A-215ENST00000583328 DNM1Q05193 864 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms