RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 VPS52Q8N1B4 723 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 TAB3Q8N5C8 712 aaPredicted RBP23.43■■□□□ 1.34
CCDC47-204ENST00000582252 TFB1MQ8WVM0 346 aaKnown RBP23.43■■□□□ 1.34
CCDC47-204ENST00000582252 ATXN2LQ8WWM7 1075 aaKnown RBP23.43■■□□□ 1.34
CCDC47-204ENST00000582252 COX16Q9P0S2 106 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 TCRBV7S3A2A0A539 114 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 C5orf60A6NFR6 353 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 POC1B-GALNT4F8VUJ3 575 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 RAG1P15918 1043 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 HP1BP3Q5SSJ5 553 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 CNKSR3Q6P9H4 555 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 KCNT2Q6UVM3 1135 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 CHMP6Q96FZ7 201 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 ARHGEF4Q9NR80 690 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 DTLQ9NZJ0 730 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PSMC3IPQ9P2W1 217 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 TBK1Q9UHD2 729 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 RAD54BQ9Y620 910 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PATJQ8NI35 1801 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 TRIM43BA6NCK2 446 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 TMEM189-UBE2V1I3L0A0 370 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 EEF2KO00418 725 aaKnown RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 BRAFP15056 766 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 BDNFP23560 247 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 GEMIN4P57678 1058 aaKnown RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 YWHAHQ04917 246 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 NOMO2Q5JPE7 1267 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PM20D1Q6GTS8 502 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 GPRIN1Q7Z2K8 1008 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PYROXD2Q8N2H3 581 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 HASPINQ8TF76 798 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 DYDC1Q8WWB3 177 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 TRIM43Q96BQ3 446 aaPredicted RBP23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PKMYT1Q99640 499 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 KCNK9Q9NPC2 374 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PIGVQ9NUD9 493 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 GGA2Q9UJY4 613 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 PTPRDP23468 1912 aa23.42■■□□□ 1.34
CCDC47-204ENST00000582252 TMEM120BA0PK00 339 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 RASA4BC9J798 803 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 PPP1R12AO14974 1030 aaPredicted RBP23.41■■□□□ 1.34
CCDC47-204ENST00000582252 RASA4O43374 803 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 DGKIO75912 1065 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 FYNP06241 537 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 ADRA1BP35368 520 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 PDK1Q15118 436 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 ARHGEF18Q6ZSZ5 1173 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 C3orf62Q6ZUJ4 267 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 BEND5Q7L4P6 421 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 MCUQ8NE86 351 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 OLFM3Q96PB7 478 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 ACSS3Q9H6R3 686 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 NKIRAS1Q9NYS0 192 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 PCDHB7Q9Y5E2 793 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 CLUHO75153 1309 aa23.41■■□□□ 1.34
CCDC47-204ENST00000582252 FNDC1Q4ZHG4 1894 aaPredicted RBP23.41■■□□□ 1.34
CCDC47-204ENST00000582252 TPSB2P20231 275 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 CACNA2D1P54289 1103 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 GPX6P59796 221 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 PITX1P78337 314 aaPredicted RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 GAD2Q05329 585 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 SLC10A2Q12908 348 aaPredicted RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 IKBKEQ14164 716 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 PAFAH1B3Q15102 231 aaKnown RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 TPSAB1Q15661 275 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 TCTN1Q2MV58 587 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 MSS51Q4VC12 460 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 CAPN12Q6ZSI9 719 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 CPLX4Q7Z7G2 160 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 SPATA2LQ8IUW3 424 aaPredicted RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 TMEM199Q8N511 208 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 MAML1Q92585 1016 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 LRRC39Q96DD0 335 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 FAM193BQ96PV7 902 aaPredicted RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 NSRP1Q9H0G5 558 aaKnown RBP23.4■■□□□ 1.34
CCDC47-204ENST00000582252 DDIT4Q9NX09 232 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 RABGEF1Q9UJ41 708 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 FBXW11Q9UKB1 542 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 LRFN2Q9ULH4 789 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 NLRC5Q86WI3 1866 aa23.4■■□□□ 1.34
CCDC47-204ENST00000582252 HOXA2O43364 376 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 CREB3O43889 395 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 MAP3K6O95382 1288 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 FDFT1P37268 417 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 HCAR3P49019 387 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 NRLP54845 237 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 SARNPP82979 210 aaKnown RBP23.39■■□□□ 1.34
CCDC47-204ENST00000582252 DSC1Q08554 894 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 CLLU1OSQ5K130 101 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 RFX8Q6ZV50 586 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 SRRM1Q8IYB3 904 aaKnown RBP23.39■■□□□ 1.34
CCDC47-204ENST00000582252 CCDC110Q8TBZ0 833 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 HTR3CQ8WXA8 447 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 WDR6Q9NNW5 1121 aaKnown RBP23.39■■□□□ 1.34
CCDC47-204ENST00000582252 TMEM30AQ9NV96 361 aa23.39■■□□□ 1.34
CCDC47-204ENST00000582252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.39■■□□□ 1.34
CCDC47-204ENST00000582252 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.39■■□□□ 1.33
CCDC47-204ENST00000582252 BANF1O75531 89 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 KRT15P19012 456 aa23.39■■□□□ 1.33
CCDC47-204ENST00000582252 GCAP28676 217 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms