RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 RBM23Q86U06 439 aaKnown RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 VSIG1Q86XK7 387 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 KATNAL2Q8IYT4 538 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 RCOR2Q8IZ40 523 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 RASGEF1CQ8N431 466 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 UBL4BQ8N7F7 174 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 EFHBQ8N7U6 833 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 LEMD2Q8NC56 503 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 CMASQ8NFW8 434 aaPredicted RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 EXD1Q8NHP7 514 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 FAM71BQ8TC56 605 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 DQX1Q8TE96 717 aaKnown RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 RNF139Q8WU17 664 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 KRT35Q92764 455 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 CASP10Q92851 521 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 NTAN1Q96AB6 310 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 SLC39A13Q96H72 371 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 PBKQ96KB5 322 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 PEBP4Q96S96 227 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 OSBPL9Q96SU4 736 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 RAB6CQ9H0N0 254 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 CARD9Q9H257 536 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 TTYH1Q9H313 450 aaPredicted RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 NSUN3Q9H649 340 aaKnown RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 ZNF334Q9HCZ1 680 aaPredicted RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 PIGVQ9NUD9 493 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 DDX56Q9NY93 547 aaKnown RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 TRPM5Q9NZQ8 1165 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 RNF14Q9UBS8 474 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 CDC23Q9UJX2 597 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 TTC7AQ9ULT0 858 aaPredicted RBP7.39□□□□□ -1.23
DDX42-213ENST00000581477 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 SAR1BQ9Y6B6 198 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
DDX42-213ENST00000581477 MYO9BQ13459 2157 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CCDC195A0A1B0GUA6 201 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 C3orf70A6NLC5 250 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 KCNU1A8MYU2 1149 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ZNF487B1APH4 448 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CCL16O15467 120 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 SIAH2O43255 324 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 PRPSAP2O60256 369 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 TLR5O60602 858 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 XYLBO75191 536 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 RFPL2O75678 378 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CSPG5O95196 566 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ZRANB2O95218 330 aaKnown RBP eCLIP7.38□□□□□ -1.23
DDX42-213ENST00000581477 OLFM2O95897 454 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 F12P00748 615 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 IGLV3-27P01718 113 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 RARAP10276 462 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 PYGMP11217 842 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CDC25CP30307 473 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 PTPN7P35236 360 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ADRA1BP35368 520 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 MARCKSL1P49006 195 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ARSEP51690 589 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 KPNA1P52294 538 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 RING1Q06587 406 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 SCAPQ12770 1279 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 HYAL1Q12794 435 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 MTA1Q13330 715 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ADAM15Q13444 863 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 TRIP4Q15650 581 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 TAZQ16635 292 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CDO1Q16878 200 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 BRMS1LQ5PSV4 323 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 DNTTIP2Q5QJE6 756 aaKnown RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 C10orf120Q5SQS8 335 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 HECTD3Q5T447 861 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ERMARDQ5T6L9 678 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 SND1Q7KZF4 910 aaKnown RBP eCLIP7.38□□□□□ -1.23
DDX42-213ENST00000581477 RSRC2Q7L4I2 434 aaKnown RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 TADA2BQ86TJ2 420 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 TAC4Q86UU9 113 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CREG2Q8IUH2 290 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 COG1Q8WTW3 980 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ZNF707Q96C28 371 aaPredicted RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 SERPINB11Q96P15 392 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 CCSER2Q9H7U1 834 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 L2HGDHQ9H9P8 463 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ASAH2Q9NR71 780 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 DZANK1Q9NVP4 752 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.38□□□□□ -1.23
DDX42-213ENST00000581477 DDIT4Q9NX09 232 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 ARHGEF38Q9NXL2 777 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.38□□□□□ -1.23
DDX42-213ENST00000581477 DNMT3BQ9UBC3 853 aaKnown RBP7.38□□□□□ -1.23
DDX42-213ENST00000581477 SFMBT1Q9UHJ3 866 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 DNMT3LQ9UJW3 386 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 FZD10Q9ULW2 581 aa7.38□□□□□ -1.23
DDX42-213ENST00000581477 TLR6Q9Y2C9 796 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms