RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MTMR12Q9C0I1 747 aa14.81□□□□□ -0.04
CSNK1D-213ENST00000580446 SGK2Q9HBY8 427 aa14.81□□□□□ -0.04
CSNK1D-213ENST00000580446 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
CSNK1D-213ENST00000580446 PRSS16Q9NQE7 514 aa14.81□□□□□ -0.04
CSNK1D-213ENST00000580446 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.045e-7■■■■■ 34.9
CSNK1D-213ENST00000580446 LSM7Q9UK45 103 aaKnown RBP14.81□□□□□ -0.04
CSNK1D-213ENST00000580446 CSMD1Q96PZ7 3565 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 TGM2P21980 687 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 RXRGP48443 463 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 TRAPPC10P48553 1259 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 SLC5A3P53794 718 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 IL17AQ16552 155 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 SRRM1Q8IYB3 904 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 MYCT1Q8N699 235 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 LRRC52Q8N7C0 313 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 C4orf32Q8N8J7 132 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 HTR3CQ8WXA8 447 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 CEP295NLQ96MC4 621 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 DUSP9Q99956 384 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 SEMA3CQ99985 751 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 REEP2Q9BRK0 252 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 ZHX3Q9H4I2 956 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 OSER1Q9NX31 292 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 FBXL12Q9NXK8 326 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 CYP46A1Q9Y6A2 500 aa14.8□□□□□ -0.04
CSNK1D-213ENST00000580446 OTOGQ6ZRI0 2925 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 A0A1W2PP55 124 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 GOLGA8IPA6NC78 632 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 GOLGA8JA6NMD2 632 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 AGRPO00253 132 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 NPC1O15118 1278 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 NOBOXO60393 691 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 JAK2O60674 1132 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 PENKP01210 267 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 THEGLP0DJG4 465 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 DUSP3P51452 185 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 PPP2CBP62714 309 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 PPP2CAP67775 309 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 EHHADHQ08426 723 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 DHX8Q14562 1220 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 MAPRE1Q15691 268 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 POM121L1PQ3SYA9 428 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 TTC31Q49AM3 519 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 TTC38Q5R3I4 469 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 Q6ZNB5 142 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 TIPINQ9BVW5 301 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 CELSR2Q9HCU4 2923 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 LARSQ9P2J5 1176 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 ENTPD2Q9Y5L3 495 aa14.79□□□□□ -0.04
CSNK1D-213ENST00000580446 LY6G6EA0A0G2JKS1 128 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 H0YCG3 227 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 RTN3O95197 1032 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 IL18RAPO95256 599 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 KLKB1P03952 638 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 HMBSP08397 361 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 ZDHHC11BP0C7U3 371 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 PLA2G4BP0C869 781 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 TNFRSF8P28908 595 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 SLC12A3P55017 1021 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 RBP5P82980 135 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 KRT79Q5XKE5 535 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 IGF2-ASQ6U949 168 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 ZC3H3Q8IXZ2 948 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 IGSF22Q8N9C0 903 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 POMGNT1Q8WZA1 660 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 WASF1Q92558 559 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 HPDLQ96IR7 371 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 NEUROG2Q9H2A3 272 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 TMEM245Q9H330 911 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 PDRG1Q9NUG6 133 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 GEMIN8Q9NWZ8 242 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 PCDHGA4Q9Y5G9 962 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 U3KQA8 63 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 CACNA1DQ01668 2161 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 CKAP5Q14008 2032 aa14.78□□□□□ -0.04
CSNK1D-213ENST00000580446 ZFC3H1O60293 1989 aaKnown RBP14.77□□□□□ -0.04
CSNK1D-213ENST00000580446 MID1O15344 667 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 PFKFB2O60825 505 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 CDC45O75419 566 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 RNASEH2AO75792 299 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 SFTPCP11686 197 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 CKMT1AP12532 417 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 PTPN1P18031 435 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 WARSP23381 471 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 MAT2AP31153 395 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 UQCRFS1P47985 274 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 TUBP50607 506 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 ZNF776Q68DI1 518 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 XKR5Q6UX68 686 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 LIMS2Q7Z4I7 341 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 JAMLQ86YT9 394 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 SYT2Q8N9I0 419 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 OR6B3Q8NGW1 331 aa14.77□□□□□ -0.05
CSNK1D-213ENST00000580446 OR4C6Q8NH72 309 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms